Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso4g00465 | ATGAAAGATGTGGCACTCACGGACAAGAAAGCCACGGACGCTCGCATTGCGGGTTCATTCCTGGTAGTCAAAGACGCTAAACGCAAAGGCCTTGCTTATGGGGAAAAAGAACACACTCCGAGCATATTTCTGAATCGATTTAAAGTACATGGAGATATGATTCAAGTTCTAGGGTTCACTTTGCTAGTAGGGTTTTGGGTTTTGTTAAGCCTAGAAGAGGTGACATCACATGGAGATCATCCTTTTGCAAAAATTGGCATACATCAAGTGACATTTGCTCTAAGTGATGCTGCCTATGTCAAAGCTTCTCCTGCAATTCTAGGATCAAAAGACCAAAATTCTGAATGGGTGACTGTATATATTAGTTCATATAGTCTATTTGAAGCTAACAGTGATTCAACTTGCCTTCCTGAAAATTCAAGATTAAGCCCTCCATATTTGTGCTCTGCGCCTATTAAGTTTCAATATGCAAATTACACCAATCCTGATTACAAGTTTACAGGAGAAGCATCATTAAAGCTTCAATTGATCAACCAAAGATCTGATTTCTCTTTTGCATTATTCACAGGAGGATTATCAACTCCAATTCTTGTGGCAGTTTCAAATACAGTTGCTTTTGAAAACCCAAACGCACCAATTTACCCACGGTTAGCTCAAGGAAAGATGTGGGATGAAATGACTGTAACATGGACAAGTGGATATGGAATCACTGAAGCAGAGCCTTTTGTCGAATGGGGTAAAATAGGTGGAGACCAGAGGCATTCTTCTGCTGGAACTTTGACTTTTGACCGCCGTAGCACTGGTGCACCAGCAAGAACTGTGGGTTGGCGTGATCCTGGCTATATTCATACTAGCTTCTTGAAAGACTTATGGCCCAATCAAGTGTATACATACAAGCTAGGGCACAAATTGTTGAATGTTACAACCATCTGGAGCTAG | 939 | 41.11 | MKDVALTDKKATDARIAGSFLVVKDAKRKGLAYGEKEHTPSIFLNRFKVHGDMIQVLGFTLLVGFWVLLSLEEVTSHGDHPFAKIGIHQVTFALSDAAYVKASPAILGSKDQNSEWVTVYISSYSLFEANSDSTCLPENSRLSPPYLCSAPIKFQYANYTNPDYKFTGEASLKLQLINQRSDFSFALFTGGLSTPILVAVSNTVAFENPNAPIYPRLAQGKMWDEMTVTWTSGYGITEAEPFVEWGKIGGDQRHSSAGTLTFDRRSTGAPARTVGWRDPGYIHTSFLKDLWPNQVYTYKLGHKLLNVTTIWS | 312 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso4g00465 | 312 | SUPERFAMILY | Purple acid phosphatase, N-terminal domain | 189 | 309 | IPR008963 | GO:0003993(InterPro)|GO:0046872(InterPro) | |
| Smso4g00465 | 312 | PANTHER | PURPLE ACID PHOSPHATASE-RELATED | 81 | 311 | - | - | |
| Smso4g00465 | 312 | Pfam | Purple acid Phosphatase, N-terminal domain | 216 | 303 | IPR015914 | GO:0003993(InterPro)|GO:0046872(InterPro) | |
| Smso4g00465 | 312 | Gene3D | - | 211 | 311 | - | - | |
| Smso4g00465 | 312 | Pfam | Fn3-like domain from Purple Acid Phosphatase | 100 | 208 | IPR040974 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso4g00465 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4991894 | Smso | Smso4g00465 | Smso-Chr4:6070717 | Smso6g00144 | Smso-Chr6:1678981 | |
| 5018578 | Smso | Smso4g00465 | Smso-Chr4:6070717 | Smso21g00495 | Smso-Chr21:5035992 |