Gene detail

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Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso4g01353	ATGAAGGAGCAGGTCGTCGCCGAAGAGAAATCGGACGGTTTGGATATCGTCTCGATCGGAACATTGTACGAAGGTCCATGGGAGAAGAAGTATTGGAGTTCATCCAGGGGCAAAGACAGGCATCCATATCCAGTTGGATATGTAGCTCATTGGTCGAATAACGGGAATACCTACGAGATGGCAATCAGTGAGGGACTTAAAGGACCTGAATTTGTGATTAGTTCCACGGATGGACAATCTTGTTCTGGTCAAACTCCAGATATTGCTTGGGAGGGTTTTCAAAAGAAGAGCTGTGTCCGCATAAAATTTTGGCGAGGGAAGAGATTTTCATGCAAGATAGATGGTGCCGAGCTTTTTGGGTTCAAAAATGCACATGTCATGAGGTTACTGCGGGGATTGAAGGCAAACGTCAGCCAAATCACAGAGAAATGTTTGCCATCTTTGCCCTTTGATAATGGACAGTCTGAAGGAACACATGAACATCAAACTAAAGATCTTGATTTGCAAGTGAATTTGGTTAAAATCCAGGGTAAAGAGAAAAAAAGTAATAAACGTAAAGAAATTCATGTGAAATCAGTTGGTGGGCCTGGACCAAAAAGAGAGCGGCCTCAAGATTTGACTCAAAATGATCATGAACCACATTGCAGGCAGAGTTTTGAAGGGAATCTTAACAATGGGATCCTTTCAAGTGCGTCAAATTTAAGCGGAAGTAATATATCTCATATATTATCAGCAGAAGAAGGGATGCAGTTTGATTCCCTTATTCCGTCTGACCATCTTGAAAAAGATAAATGTCTCTCTGTCCAAGAAGCAAGCAATTCTGTTGGTTCCAATGATCTTCCGATCACTGAAGAAGGTGCCAAGTTGTTAAAAAGCCAGGAAAATCACGACTTGTCGATGTTTAACCGCACACCAGGGTTCACTTCCTCAAAACCTGTAGATGAAAAGGGAGACCCACCACTTAAAAAAGAATCACAGATGTTGGATGATGCAGACCTCTACGCACCTGATACTTTGGATCTAGCCTTAGACGACAGTACATACAATTTGGAGGTGGAGATCCCCAAAGAAAATATCTGCACATTAAATGAAAAGTTAAATGCTACCCAGATTTTAGTTTCTGAAAAATGTGTAACTGACTTTTTAAAAGACGAGATGGTTATAGCTGCTGGAAGTGATTATTCTGAAAAGAGTGATTCAGATCCAGTTGGACAGGAGATATCCAACTCAATGATGGCAGTACTGCTTCCGCGAGCTCTTCCTCTGCTTAAGACTTTCTCAAGAAAGAAAAAGAAAAATCTAGATGGGATGTTCAAGAAGGAAAGAAAGGAGGTTGCCCAATATCTAAAAGATGAACCTCCAGCCAAATCTTCTGACCATTTGGAAAAGCTTAGTGGTGAAGTTAACATTCCAGACGAACCTTCTACTGAAAAGTTTACATTTGAGAAGCATAATGAAAGTGATCTTTTCCCGAGTGCAAGTACGTTTTCAGCTGTATGTGGTTTAGAATATTCAACAACTGTTGCACCTGATAGTTTTGAGAATGATCAATGTGAAATCATAGATTGCTCTCGGGCTGGGCAGGTTCAAGATGCTGTTAAAGCTGATCAAAATACTTCTAGTATAGATTTATGCACCCATGAGGAGCAGCATGAAGAAGTAGGAGTTAGTGTTGGCAATGTGTCTTCTATGCTAACTGTTGATCATGTAGCTCAAAAAGGAATAATATGTTTCACAGGGGGAGTTGATGCAGCAGTTCTACCACATCAAGAGGTAGATGGTTTGATTTCAGTTTTTCAGGGTCAAAGAATAAGTCAACGTGACAAGACTAAATTGGTGCACAATGATGAGGAAGCTAAAGTGGCGCCTAATAATGAACTAGAGAATATCTTTGAACTTGTTGGTTGCTATATGCTTCCAAAACCAATTTCAATGGCAATGATGAAAACAAAAGGGAATGAGGTTTTTATATGTGTTTTATGTGGCTATTTGATGGAAAACGACAGGACATTGTTCATTTACAAGGCATCAATTAAAGGAGAATCTAGAGGATGCCCTTCTTTTATTGGTCACACAACAATTATCTCACCAACTTCAACGAATTCATCTGGTAGACAAATTATTTTGGATAGTTCTAGTTTACAGTTTACTCCAGATGGAAAATCCCTTGTTTTACTCAACAATATTAAAGCTCCTTACTGCAGGGAGGGCAGAGTGAACTGTGGGTGTTCAGTGTGTACATCAGATTGCTTTGAGAAGAACGCGGTAAAAATTGTGCAAGTAAAACTTGGCTATGTTCAAGTAGTATGCAAACTGAAAACAACTAACAATGTGTGCTCCATATTAGTTTGTGAACCTAGTTATCTTGTTGCTTCTGAAGAGAGTGGAAAAATGAACTTATGGACCATGAACTCATCATGGAGTGCACCAACAGACCAAAGCTATTTGTCAACGTCTGATTGCATGCCTAATTGTATAGTTGAGATGAAGAGAATACCAAATTTCCCAGCTCTCATTGTTGGTCATAGTGCATTTGGGGATTTTCTCTTGTGGGATTTAACAAGAAGAACCCTTGTGTCGAAGTTTTCAGCTCCAAGAACTTCATTTCTCCCCTTCATTCCAATCAATTTATTTAGGTGTCCTAGTCGAGCTTTATCTACCTCAGATGCTTGTAGGAAGAAACAAGTTGAAGACATCATGGAAGAAACACAAAGGTGGTCTTTAGAAACAAACAACCATGATTCTCTTCCAGTAAATGAAGAACATCTGTCCCTTGTTCTTCTCGTCTCGTCTATCTCAAATCTTGATCTTGTTGATCAATATTCATATAAAGATTTGGGAGTCAGTCCAGGCAGATCTTGGAGCCTAGCACTATTGGCCAAAAATAGAGTGGTTTCAGAAAATGCTTTGGATCCAAGTGCCACCATAGTTGGTGCATCATCAGGTTATGGAATCATAGGTACATGTGACAGTTCTCTATACATTTGGGAACTATCCACAGGTACCAAGCTCGGCTATCTCAGCCATTGCACAGGAGCCACGGTGACATGTTTGGCGGCTGATGACTCAGACTCCGGCGCTTTTGCGGTGGCTGTTGACGGCAGCCAGCTGCGGATATACGCTCCAGGAACATTGGCAAATAAAAAAACATGA	3153	40.44	MKEQVVAEEKSDGLDIVSIGTLYEGPWEKKYWSSSRGKDRHPYPVGYVAHWSNNGNTYEMAISEGLKGPEFVISSTDGQSCSGQTPDIAWEGFQKKSCVRIKFWRGKRFSCKIDGAELFGFKNAHVMRLLRGLKANVSQITEKCLPSLPFDNGQSEGTHEHQTKDLDLQVNLVKIQGKEKKSNKRKEIHVKSVGGPGPKRERPQDLTQNDHEPHCRQSFEGNLNNGILSSASNLSGSNISHILSAEEGMQFDSLIPSDHLEKDKCLSVQEASNSVGSNDLPITEEGAKLLKSQENHDLSMFNRTPGFTSSKPVDEKGDPPLKKESQMLDDADLYAPDTLDLALDDSTYNLEVEIPKENICTLNEKLNATQILVSEKCVTDFLKDEMVIAAGSDYSEKSDSDPVGQEISNSMMAVLLPRALPLLKTFSRKKKKNLDGMFKKERKEVAQYLKDEPPAKSSDHLEKLSGEVNIPDEPSTEKFTFEKHNESDLFPSASTFSAVCGLEYSTTVAPDSFENDQCEIIDCSRAGQVQDAVKADQNTSSIDLCTHEEQHEEVGVSVGNVSSMLTVDHVAQKGIICFTGGVDAAVLPHQEVDGLISVFQGQRISQRDKTKLVHNDEEAKVAPNNELENIFELVGCYMLPKPISMAMMKTKGNEVFICVLCGYLMENDRTLFIYKASIKGESRGCPSFIGHTTIISPTSTNSSGRQIILDSSSLQFTPDGKSLVLLNNIKAPYCREGRVNCGCSVCTSDCFEKNAVKIVQVKLGYVQVVCKLKTTNNVCSILVCEPSYLVASEESGKMNLWTMNSSWSAPTDQSYLSTSDCMPNCIVEMKRIPNFPALIVGHSAFGDFLLWDLTRRTLVSKFSAPRTSFLPFIPINLFRCPSRALSTSDACRKKQVEDIMEETQRWSLETNNHDSLPVNEEHLSLVLLVSSISNLDLVDQYSYKDLGVSPGRSWSLALLAKNRVVSENALDPSATIVGASSGYGIIGTCDSSLYIWELSTGTKLGYLSHCTGATVTCLAADDSDSGAFAVAVDGSQLRIYAPGTLANKKT	1050

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso4g01353	1050	ProSiteProfiles	FYR domain FYRC motif profile.	66	146	IPR003889	GO:0005634(InterPro)
	Smso4g01353	1050	ProSiteProfiles	FYR domain FYRN motif profile.	6	65	IPR003888	GO:0005634(InterPro)
	Smso4g01353	1050	MobiDBLite	consensus disorder prediction	178	222	-	-
	Smso4g01353	1050	MobiDBLite	consensus disorder prediction	302	321	-	-
	Smso4g01353	1050	Gene3D	-	10	138	-	-
	Smso4g01353	1050	PANTHER	TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1	588	1026	IPR040092	GO:0005634(PANTHER)\|GO:0051726(PANTHER)
	Smso4g01353	1050	MobiDBLite	consensus disorder prediction	178	217	-	-
	Smso4g01353	1050	SUPERFAMILY	WD40 repeat-like	690	1044	IPR036322	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso4g01353	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	150760	Smso21g01318	Smso4g01353
	345019	Smso21g01318	Smso4g01353
	355682	Smso4g01353	Smso21g01318

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr21:13952321	Smso4g01353	Smso-Chr4:18385382	transposed
	Smso	Smso-Chr21:13944465	Smso4g01353	Smso-Chr4:18385382	wgd