AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso7g00010 ATGGCGCGCACTAGAATTAGAAGAAAACACTCGAAGAAAAAGATTTCCTCCGAGGGTCAACGGAAAAAGAAAAGTAGAAGGAACAAAACGAAGAAGCTTCTTCATCATGACGAATCCTTTTCTTCTCGTTCGGATGATGAATCCACTAGTTCATCTTCCAGTTCAGAAGGTGAGTATAAACGTAAAAGGGCTCGGTCCCGCTCAAGAAATGAAATCAAGGGTAGTAAGAAACGGAGTAGGAGAAGATCTTTAAGTGATGATAGCAGTGAAGATTCACCCCCCGTGAAGAAAAGAAAAAGGTCCAAGAAAAGTAAAAAGATCAAGAAGAAGAAGAGGAGTTTGAAAAGAGATGCTTATATTAGTTCTGCAAGCAGTGATCCTGGAAGCTGCTCCACTTGTAAAGATGAAGATAGCAGTAGTGATGAAATGGGTTCACATGGGAGGTCAAGGGGTAAGTCCAGAGAAAAGAAAAAGGATCATAGAGATTCAACCAAGGGTAGAATTGGAAATATGAAGAACATGAGTAAAACTAGGAGCTCTATTTCACCAAGCACTAGTTATGGCAGTGAACGCATTGAGAAAGTGACAATGGAAAACAACCCGATGAGATTAAAATCAGTTATTACTGTTGCAAACTTAGAGAAGGAAGAAGAAGACAATATGAATTACGACGGGCTTAAAGAAGAGACTGTGTATGATTATGATGATTACCCGTCTAGTAAAAGCAATGATAGTATTGAATTAGTCGATCGCTTTAATACTTCTCCTGATAAAAAAAGTGTGGTTAAAGAAGTAAACTCAGGTTCTAACCTTGATGATAACAAGGAAAAGGACAGCAATGTTTCTGGTAATATTGGATCAGAAGCGGATAATTTGGAGTTAATTTTGAGACAAAAAGCATTAGAAAACCTAAGTAGATTCCGAGGCGGGATTAAAATAAAACCAGTAGTTTCTGTTGATGATAAACCTAAGGGTGCTCAAAGTGGTGTTAACCAGCTGAAACATGAAACTGTTAGCATGACACCTGTGTCACAGCCAGTAATAAATAGGAGTAGGTTTACATGGAGAAGAGATCCTTCTGTAACCACAGCGAAAGATGAAAAGGCCGCAACTTACAGCGAGACACTCTCGAGTGGATCACAGCCTGCTGAACTGAAATTGCAGAGTGCAAATCTATCTTCCATGAGCAGGGTAGATAATAAGTTTGTGAATGAGACATCGAAAATTATGGTCAATACCAAGAATGTTGACCAAAAGTCAACTGCTGTTGTTGAAACACCCTCTACTGCTTCTATTAAAGAAGGTGAGCAGCAGAATGAAAGCAATGACAACTCTCAGTTTGAGAAGAAGACAATGTCTGTGATGAGAGGTGGTGAAACGGTGCAGGTAAGCTACAAGGTCTACATTCCAAACAGAGCTCCTGCTTTGTCTAGGAGGCAACTTAAACGGTGA 1452 39.67 MARTRIRRKHSKKKISSEGQRKKKSRRNKTKKLLHHDESFSSRSDDESTSSSSSSEGEYKRKRARSRSRNEIKGSKKRSRRRSLSDDSSEDSPPVKKRKRSKKSKKIKKKKRSLKRDAYISSASSDPGSCSTCKDEDSSSDEMGSHGRSRGKSREKKKDHRDSTKGRIGNMKNMSKTRSSISPSTSYGSERIEKVTMENNPMRLKSVITVANLEKEEEDNMNYDGLKEETVYDYDDYPSSKSNDSIELVDRFNTSPDKKSVVKEVNSGSNLDDNKEKDSNVSGNIGSEADNLELILRQKALENLSRFRGGIKIKPVVSVDDKPKGAQSGVNQLKHETVSMTPVSQPVINRSRFTWRRDPSVTTAKDEKAATYSETLSSGSQPAELKLQSANLSSMSRVDNKFVNETSKIMVNTKNVDQKSTAVVETPSTASIKEGEQQNESNDNSQFEKKTMSVMRGGETVQVSYKVYIPNRAPALSRRQLKR 483
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso7g00010 483 MobiDBLite consensus disorder prediction 168 193 - -
Smso7g00010 483 PANTHER TRANSCRIPTIONAL REGULATOR ATRX-LIKE PROTEIN 8 336 - -
Smso7g00010 483 MobiDBLite consensus disorder prediction 1 31 - -
Smso7g00010 483 MobiDBLite consensus disorder prediction 98 115 - -
Smso7g00010 483 MobiDBLite consensus disorder prediction 1 198 - -
Smso7g00010 483 MobiDBLite consensus disorder prediction 80 97 - -
Smso7g00010 483 MobiDBLite consensus disorder prediction 118 134 - -
Smso7g00010 483 MobiDBLite consensus disorder prediction 135 149 - -
Smso7g00010 483 MobiDBLite consensus disorder prediction 259 284 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso7g00010 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr29:131463 Smso7g00010 Smso-Chr7:84973 wgd