Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00029 | ATGGGGACCAGACGTGACGGGACCGTCATGCCATGGGTCTGGGAAGCCAATCGAGGTAAACCAGTCCGCGAAAACGCCACCTTTTCATTAGGCTCAGATGGTAACCTCATCCTGGCGGAGGCAAACGGGCGGATTGTGTGGCAAACCAACACCGCCAATAAAGGTGTTGTCGGTTTCGCCATACTCTCCGATGGTAACGTCGTGCTTCGTGACTCAAAGGGTAATTTTGTCTGGCAAAGCTTTGATTCCCCCACCGATACTCTCCTGGTCGGCCAAACTCTCCGGGTGAGAGGAGGGCCGTACAAGCTCGTGAGCAGGGAGTCGGTGACTAACAACGTTGACGGGGTTTATAGCTTCGTAATCGAGCCTAAAAGACTGGCTTTGTATTACAAGAACAACATGCGTTACTGGTCATCCACGTTCCCTGAATTAAACCGAGAAAATGTGACTCTAGTTAATGCCACGTTACGAATTGCGGAAACTGAGTACGAAGAGAACAACTTTCACTCACTCACGTGTAATATTGAAAACGGTCAGTTTTTTGAGTTTCCTTCTATAGATATGGGCACAGTTCGGTACAATAGCTCGTTATCATATCTCCGATTGGGAATCGACGGCAACCTAAGACTCTACACTTACCGTGCGAATGTGCGGGGAAATGCATGGAGCTTGTTGTACACTTTGTTTGATAGGCGTGAGAACGAGAATGGGATGATTTTTGAAGATGAGTGTCAGTTACCAAATCGGTGCGGGAAGTTTGGGCTTTGA | 768 | 48.31 | MGTRRDGTVMPWVWEANRGKPVRENATFSLGSDGNLILAEANGRIVWQTNTANKGVVGFAILSDGNVVLRDSKGNFVWQSFDSPTDTLLVGQTLRVRGGPYKLVSRESVTNNVDGVYSFVIEPKRLALYYKNNMRYWSSTFPELNRENVTLVNATLRIAETEYEENNFHSLTCNIENGQFFEFPSIDMGTVRYNSSLSYLRLGIDGNLRLYTYRANVRGNAWSLLYTLFDRRENENGMIFEDECQLPNRCGKFGL | 255 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00029 | 255 | CDD | B-lectin | 1 | 84 | IPR001480 | - | |
| Smso7g00029 | 255 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 12 | 254 | IPR051343 | - | |
| Smso7g00029 | 255 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 8 | 140 | IPR036426 | - | |
| Smso7g00029 | 255 | FunFam | Os04g0303100 protein | 6 | 138 | - | - | |
| Smso7g00029 | 255 | Gene3D | - | 2 | 82 | IPR036426 | - | |
| Smso7g00029 | 255 | SMART | blect-4 | 1 | 84 | IPR001480 | - | |
| Smso7g00029 | 255 | Pfam | D-mannose binding lectin | 13 | 96 | IPR001480 | - | |
| Smso7g00029 | 255 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 82 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00029 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr29:746741 | Smso7g00029 | Smso-Chr7:450839 | dispersed | |
| Smso | Smso-Chr7:450839 | Smso7g00054 | Smso-Chr7:984166 | dispersed | |
| Smso | Smso-Chr29:675869 | Smso7g00029 | Smso-Chr7:450839 | wgd |