Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso7g00065	ATGATCAAACCTTTCGTGTTTCCCGAAGGAGAGACGGTGAGGATGCGATGGCCGGCACATGCTGGGACAGAAGAGCAGGTGACGCTATATAGAGAAGCCATCAAAGCAATGAGATGTCTCTCAAAAGACCACCCGCACAGCTTCAAAAGTCAAGCTAAAATTCATTGTGCTTATTGTGGCGGAGCTTACAAAGAGAAATACGGTAGCGAGATTCGGATTCACAACACATGGCTCTACTTTCCTTTCCATCGCTGGTACCTCTATTTCTACGAGCGAATACTCGGAAAGCTGATTGGCAGACCTGATTTTTCCTTACCTTACTGGAACTGGGACGACCCACAAGGCATGGAGTTTCCGGAAATCTTTCTAACACAATATATAAACGTATACAGAGATTTGATCAAAGATGGAGGTGATACAGTAAGCTTTTTTGGCGGTCCATACATTGCTAATAATCCCAAAGAAGATACAACTAATCCGTCAGCGGGATCCGTGGAGAATGGTACTCACACTGCCGTACACGTGTGGGTAGGCAACTCAAAATTTACTAGTAAGGAGGACATGGGCCACTTCTATTCCGCTGGGTATGGCCCTTTGTTCTATGTCCACCATGCAAATGTTGACCGTATGTGGAAACTATGGAAGGATTTGGGCAAGGTGTATCAAGATGAGTTTCCAGGACACGTAGAACCCAAGGACCGAGACTGGTTAGATGCATCATATTTGTTCTATGATGAGAATGAGGAGCTTGTACGTGTCTCTAACAGAGACACCATCCACTTAGACAAGCTCAAGTACAACTACCCTGAAATCCCTATTGGAGTGCTCCAGTGGCGCACTAGTCGACCTCCTAAGCGTAATGAAGCCGACCAAATGGAGAGATCCACCCTAGATCCAGAGGTGAAGCCGCTGAGTCCAGTGTCATTCCCGATGAAACTAGATAAGATCCTGAAGGTTTCCGTGGAGAGGCCACATTTGGACAGGATTGAGGAGGATAAGAAAAAGAACGAGATTTTGAAGATAGAAAGAATAGAGTTCACCGGCAACAATGAGTTTGTGAAGTTCGATGTTTGGGCTAAAGGAGGTGTTGCTGGACATGAACACGGCAGACGAACTGAACACAACGGTGTCATTGGTGCGAAGGACAGGGTGCGAAAATCTCAAAGTCGACGGAATCAGCATCGAGTTTACGTGGAAGAAGCTTCTAGAAGAAACATTCCGAGGAAGAAACACAAAAAGTGTTCCAAGAAAATGTTAGGTTTGGATGCTGAGATTAAAAGTGATGGTTTGGTTGAAGAACTTAAAAATAATCATGCTCAAGCATCAGTGATTGAAAAACATGCAAAGTATGTGCCACCTCAGCTAAGATCTATGTCCAGAAGTGAATTTGTTGGGACGTTGGGTGAATCTAATGTGGAAGGAATTATAGGGGAAAGATCCTTAATTTTCCAGAATGGAACCGGCGCCAATAAAGGCAATAAGCAAAGAATTCCTGTCATTCTTGCAGAAAGGGAGATCCAACTCATTATTATTGACAAGAAGTGGAAAAATAAAGATGTAGTAGTATTTTACTTCCATGATGAATTCACATGGCTAAAAGGTGCTGGTCTTGTCACCATCATATTTGGTGTGAATCTATTCAACTGGTATCAGAAATTGAACAAGGAAAAATTAGATCAAGGTGAGTTGGCGGGATCTCAAACCTCTGTCCCTGGAAAATATGTTATCAGGAGGAAATGGATGATGAAGAAACTAGCCCTTGATCAGTGA	1770	43.45	MIKPFVFPEGETVRMRWPAHAGTEEQVTLYREAIKAMRCLSKDHPHSFKSQAKIHCAYCGGAYKEKYGSEIRIHNTWLYFPFHRWYLYFYERILGKLIGRPDFSLPYWNWDDPQGMEFPEIFLTQYINVYRDLIKDGGDTVSFFGGPYIANNPKEDTTNPSAGSVENGTHTAVHVWVGNSKFTSKEDMGHFYSAGYGPLFYVHHANVDRMWKLWKDLGKVYQDEFPGHVEPKDRDWLDASYLFYDENEELVRVSNRDTIHLDKLKYNYPEIPIGVLQWRTSRPPKRNEADQMERSTLDPEVKPLSPVSFPMKLDKILKVSVERPHLDRIEEDKKKNEILKIERIEFTGNNEFVKFDVWAKGGVAGHEHGRRTEHNGVIGAKDRVRKSQSRRNQHRVYVEEASRRNIPRKKHKKCSKKMLGLDAEIKSDGLVEELKNNHAQASVIEKHAKYVPPQLRSMSRSEFVGTLGESNVEGIIGERSLIFQNGTGANKGNKQRIPVILAEREIQLIIIDKKWKNKDVVVFYFHDEFTWLKGAGLVTIIFGVNLFNWYQKLNKEKLDQGELAGSQTSVPGKYVIRRKWMMKKLALDQ	589

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso7g00065	589	PANTHER	TYROSINASE FAMILY MEMBER	128	370	IPR050316	-
	Smso7g00065	589	Pfam	Protein of unknown function (DUF-B2219)	309	360	IPR022740	GO:0004097(InterPro)
	Smso7g00065	589	Gene3D	-	128	271	IPR008922	-
	Smso7g00065	589	PRINTS	Tyrosinase copper-binding domain signature	74	91	IPR002227	GO:0016491(InterPro)
	Smso7g00065	589	PRINTS	Tyrosinase copper-binding domain signature	196	214	IPR002227	GO:0016491(InterPro)
	Smso7g00065	589	MobiDBLite	consensus disorder prediction	282	301	-	-
	Smso7g00065	589	SUPERFAMILY	Di-copper centre-containing domain	7	272	IPR008922	-
	Smso7g00065	589	Gene3D	-	1	127	IPR008922	-
	Smso7g00065	589	Pfam	Polyphenol oxidase middle domain	232	283	IPR022739	GO:0004097(InterPro)
	Smso7g00065	589	MobiDBLite	consensus disorder prediction	283	297	-	-
	Smso7g00065	589	Pfam	Common central domain of tyrosinase	46	114	IPR002227	GO:0016491(InterPro)
	Smso7g00065	589	Pfam	Common central domain of tyrosinase	161	216	IPR002227	GO:0016491(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso7g00065	K00422	polyphenol oxidase [EC:1.10.3.1]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr3:92013276	Smso7g00065	Smso-Chr7:1212305	dispersed
	Smso	Smso-Chr7:1212305	Smso9g00680	Smso-Chr9:15706223	dispersed
	Smso	Smso-Chr7:1166532	Smso7g00065	Smso-Chr7:1212305	proximal
	Smso	Smso-Chr7:1212305	Smso7g00066	Smso-Chr7:1329230	tandem