Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00067 | ATGCTCCTGGAACATATCATAGAAATGCGAGTACATGTGGATTGCCCCGGATGTGAGAACAAGATCCGTAAAGCTCTTCAAAGACTCAAAGGGGTGGAAAACGTCGATATAGACATGGGATTACAAAAGGTGACAGTCACGGGAATCGCCGACCAGAAGAAGGTGCTGAAAACGGTGAGAAAGACCGGCCGCCGAGCCGAGATATGGAACATACCCTATAACCCTGATATTCGTACACATAACTACAACGTTAATCAATACGCTCAACAACAGCAACAACAAAATGGTGCTTCGGGTCAAGCCCCCTCGGCAACATTCTACACCCGACAGCCATCGTCTACATCATCGTACAACTACTACAAACACGGTTATGATGACCACTACTTTTATAATCCGGTCCAGTCCTCAGGTTTAATCGGACACCAGACTGGTGCTGCCTTTAGCGACGAAAATACCAATGCTGCTTGTAAAATTATGTAG | 480 | 46.04 | MLLEHIIEMRVHVDCPGCENKIRKALQRLKGVENVDIDMGLQKVTVTGIADQKKVLKTVRKTGRRAEIWNIPYNPDIRTHNYNVNQYAQQQQQQNGASGQAPSATFYTRQPSSTSSYNYYKHGYDDHYFYNPVQSSGLIGHQTGAAFSDENTNAACKIM | 159 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00067 | 159 | SUPERFAMILY | HMA, heavy metal-associated domain | 6 | 70 | IPR036163 | GO:0046872(InterPro) | |
| Smso7g00067 | 159 | Gene3D | - | 3 | 68 | - | - | |
| Smso7g00067 | 159 | ProSiteProfiles | Heavy-metal-associated domain profile. | 4 | 67 | IPR006121 | GO:0046872(InterPro) | |
| Smso7g00067 | 159 | PANTHER | COPPER TRANSPORT PROTEIN ATOX1-RELATED | 6 | 159 | IPR045181 | GO:0046872(InterPro) | |
| Smso7g00067 | 159 | CDD | HMA | 8 | 67 | IPR006121 | GO:0046872(InterPro) | |
| Smso7g00067 | 159 | Pfam | Heavy-metal-associated domain | 10 | 64 | IPR006121 | GO:0046872(InterPro) | |
| Smso7g00067 | 159 | MobiDBLite | consensus disorder prediction | 90 | 109 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00067 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr12:92233373 | Smso7g00067 | Smso-Chr7:1352157 | dispersed | |
| Smso | Smso-Chr19:659372 | Smso7g00067 | Smso-Chr7:1352157 | dispersed | |
| Smso | Smso-Chr6:12832635 | Smso7g00067 | Smso-Chr7:1352157 | dispersed | |
| Smso | Smso-Chr6:26108340 | Smso7g00067 | Smso-Chr7:1352157 | dispersed | |
| Smso | Smso-Chr29:1485756 | Smso7g00067 | Smso-Chr7:1352157 | wgd |