Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso7g00123	ATGATAAGATTAGCATTCGGGCCTGATAATTTAATACACGGGTTAATCAATAAAGCCAAAACACACCTTAAACTACCTTCAAACACCACTGTTGGTCAACCGATTTCACCTCCTCGGGTGAACTCTATCCCTGATATGCCAATTGGTCCGATTCACTTCACACCGTTCTCTCCTTCAACCCGTCATTCACCATTAACGATCCAAGTTCCAACCCGTTGTTGTGATCACCATGGTCAACCCGTTGACTTTGTTCCCATGGGTTACCCGTCTTCATATCCTGAAGATTACCACCCTCACAACCACCTTCGTTTCATGTCTTTAGAAGATCAAATGGAGCCCGTTAACAGCCCGGATTTTTCTCCTAGTAACTACTATTCACCCGAGCCTGCATTGGGTCCTCGGGCCAATAGGAGGTCGCCAAGTTTGCCCGAATTTCCTTTTAAAGTTTGTCATTACTTCATTAAAGGGTTTTGTAGACATGGAAACAACTGTAGGTATTTACACCCTACTCCTGAAAGCTTTTCACAAATCTTCAGCTCTAAATTGTGCGAGGACGATAACGTCTTTTCACCCATGTCTCTTGAGAAACTAGAGTTAGAACTCACTGAGTTACTGAAATCAAGAAGAGGGTTTCCTGTTTCCATTGCTTCTTTACCAATGATATATTATGAAAAATTCGGTAAAACACTTCAAGCCGAAGGATATTTGACCGAAAGTCAAAGGCACGGGAAAGCCGGTTATAGTTTGACCAAACTTCTTGCTCGCCTTAGAAGCATTTGTCTCATTGATAGGCCACATGGGCAACACGCAGTCGTGTTGGCTGATGACATGGCAAAATGGATGGATCATATTGGAGATAGAAATGAACATGGTGGAATTGTGGCTGGTTCTAGACAGATATATTTGACTTTTCCAGCTGAAAGTACCTTTTCAGAGCTTGATGTTTACAATTATTTCAACAAATTCGGGCCAGTTCGTGATGTGAGAATTCCATGTCAGCAAAAGAGAATGTTTGGATTTGTGACTTTTGTGTTTGCGGATACCGTTAGGCATGTTTTAAACAAGGGGAATCCTCATTTTGTTAGTGGTGCGCGTGTTTTGGTTAAACCATACCGTGAAAAATGCAAGATTGATGATAGGAAGCATGGTTACACATATCAACATCATATGTACCAAGGTTCTCACTGTCTTGATGCTGAACTTGGGCTGCAGTCAAGCAATGCTAATGCACAACAAATGGACTTCCATTCGACTGAGCGTTTTAACTATTTTCTTGATGTTTTAAACAACGGCGCCACTAGTGAACAAACGTTTAGGCAGATCAATACCGACTACAACGAGCAAGAAAGCAGCCAGGGACTGAATCTTCCGGAAAGCCCGTTTGCATCGGGATTAGGAGGTGAAATATCAACAGTTATATAG	1422	42.05	MIRLAFGPDNLIHGLINKAKTHLKLPSNTTVGQPISPPRVNSIPDMPIGPIHFTPFSPSTRHSPLTIQVPTRCCDHHGQPVDFVPMGYPSSYPEDYHPHNHLRFMSLEDQMEPVNSPDFSPSNYYSPEPALGPRANRRSPSLPEFPFKVCHYFIKGFCRHGNNCRYLHPTPESFSQIFSSKLCEDDNVFSPMSLEKLELELTELLKSRRGFPVSIASLPMIYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARLRSICLIDRPHGQHAVVLADDMAKWMDHIGDRNEHGGIVAGSRQIYLTFPAESTFSELDVYNYFNKFGPVRDVRIPCQQKRMFGFVTFVFADTVRHVLNKGNPHFVSGARVLVKPYREKCKIDDRKHGYTYQHHMYQGSHCLDAELGLQSSNANAQQMDFHSTERFNYFLDVLNNGATSEQTFRQINTDYNEQESSQGLNLPESPFASGLGGEISTVI	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso7g00123	473	SMART	c3hfinal6	146	170	IPR000571	GO:0046872(InterPro)
	Smso7g00123	473	Gene3D	-	304	377	IPR012677	-
	Smso7g00123	473	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	305	376	-	-
	Smso7g00123	473	SUPERFAMILY	CCCH zinc finger	147	169	IPR036855	GO:0046872(InterPro)
	Smso7g00123	473	ProSiteProfiles	OST-type HTH domain profile.	193	276	IPR025605	-
	Smso7g00123	473	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	298	373	IPR000504	GO:0003723(InterPro)
	Smso7g00123	473	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	411	-	-
	Smso7g00123	473	SMART	rrm1-1	299	369	IPR000504	GO:0003723(InterPro)
	Smso7g00123	473	SUPERFAMILY	RNA-binding domain, RBD	310	388	IPR035979	GO:0003676(InterPro)
	Smso7g00123	473	Pfam	RNA recognition motif	311	357	IPR000504	GO:0003723(InterPro)
	Smso7g00123	473	Gene3D	-	145	200	-	-
	Smso7g00123	473	ProSiteProfiles	Zinc finger C3H1-type profile.	144	171	IPR000571	GO:0046872(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso7g00123	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	431865	Smso26g01894	Smso7g00123

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr2:6121855	Smso7g00123	Smso-Chr7:2087110	dispersed
	Smso	Smso-Chr3:112867728	Smso7g00123	Smso-Chr7:2087110	dispersed
	Smso	Smso-Chr26:36754816	Smso7g00123	Smso-Chr7:2087110	transposed
	Smso	Smso-Chr1:88438576	Smso7g00123	Smso-Chr7:2087110	wgd
	Smso	Smso-Chr26:36749427	Smso7g00123	Smso-Chr7:2087110	wgd
	Smso	Smso-Chr29:2433926	Smso7g00123	Smso-Chr7:2087110	wgd