AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00130 | ATGGGTAAAATCTTGTGTGTATTATTTTGCATTTTGATATCGAGTCTGGCTTCATCTTATGCTCAGAACTGCCAGAATTTTGCCTTTTCGACCAACGTAATATACACCACATGCGTCCCTTTACCTGTTTTGAACTCAAATCTCCACTGGAACTACCACCCCTCCAACGGCACCGTCGACCTGGCTTTCCGGCACACCGGATCGGACACGTCTCAGTGGGTTGCTTGGGCGCTTAACGTTGACAGGTCCGGTATGGTTGGGGCTCAGGCTCTTGTTGCCGTACCAAACTCAGACGGCTCCATTCGGGCTTATACTTCATCAGTAACCGTTTACGGCACCACTCTGCAACCGAGTACGTTGAGCTTCGCCGTGCCTAACATCACGGCGGAGAGGGTTAACGGCGATGTGGTGATTTATGCGACGTTGGTGTTGCCTAGCGGAGGGACGAGATTTAATCAAGTGTGGCAGGTGGGTCCTACTAATAATGGAGCTCCGATTAGGCACTCGCTAAATTCCGATAACCGGAATTCTCTCGGCTCAGTGGATTTTAGCACCGGTGAGGCTGGTGCCGGCGGAAGTGTTGGTGGGTCGCGGATGCGCCGGAGAAACACTCATGGAGTATTGAACGCGGTTAGTTGGGGAGTATTGATGCCCATGGGAGCTATGGCGGCAAGATATTTAAAGGTGTTTAACGTCGCTAATCCAGCTTGGTTTTACATCCATGTTGCCACCCAATCATCAGCCTATATCGTTGGTGTTGCCGGATGGGCCACCGGACTCAAGCTCGGCAGTGACTCCCCCGGAATCACACACGATACTCACCGGAACATCGGAATCATCCTGTTTTCTTTTGCAACACTTCAGGTTTTTGCTTTGCTTTTGAGGCCTAAACCCGACCACAAATACAGATTCTACTGGAACATCTACCACCATTCTCTCGGATACTCTATCATCATCTTGAGCATCATCAACGTCTACGAGGGACTCGATATCTTGGACCCTGAGAAGAAGTGGAAGAATGCTTACACGGGCATACTTATTTCTTTGGGCGTTATTACAGTTATTATGGAAGCTTTGACATGGGTTATTGTTTTAAAGAGGAAGAAAGAAGAGAAAAGGACACATGCAGGGGCTAATGGTTCTTATGGAGCCAATGGAGTTGACCAGTCAGCATAG | 1176 | 48.89 | MGKILCVLFCILISSLASSYAQNCQNFAFSTNVIYTTCVPLPVLNSNLHWNYHPSNGTVDLAFRHTGSDTSQWVAWALNVDRSGMVGAQALVAVPNSDGSIRAYTSSVTVYGTTLQPSTLSFAVPNITAERVNGDVVIYATLVLPSGGTRFNQVWQVGPTNNGAPIRHSLNSDNRNSLGSVDFSTGEAGAGGSVGGSRMRRRNTHGVLNAVSWGVLMPMGAMAARYLKVFNVANPAWFYIHVATQSSAYIVGVAGWATGLKLGSDSPGITHDTHRNIGIILFSFATLQVFALLLRPKPDHKYRFYWNIYHHSLGYSIIILSIINVYEGLDILDPEKKWKNAYTGILISLGVITVIMEALTWVIVLKRKKEEKRTHAGANGSYGANGVDQSA | 391 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00130 | 391 | ProSiteProfiles | DOMON domain profile. | 44 | 158 | IPR005018 | - | |
| Smso7g00130 | 391 | CDD | DOMON-CIL1-like | 35 | 185 | IPR045265 | - | |
| Smso7g00130 | 391 | ProSiteProfiles | Cytochrome b561 domain profile. | 167 | 365 | IPR006593 | - | |
| Smso7g00130 | 391 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 7 | 371 | - | - | |
| Smso7g00130 | 391 | Pfam | Eukaryotic cytochrome b561 | 205 | 329 | IPR006593 | - | |
| Smso7g00130 | 391 | Gene3D | - | 185 | 375 | - | - | |
| Smso7g00130 | 391 | MobiDBLite | consensus disorder prediction | 180 | 200 | - | - | |
| Smso7g00130 | 391 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 183 | 373 | - | - | |
| Smso7g00130 | 391 | PIRSF | UCP037471 | 1 | 390 | IPR017214 | - | |
| Smso7g00130 | 391 | SMART | 561-7 | 204 | 329 | IPR006593 | - | |
| Smso7g00130 | 391 | CDD | Cyt-b561-FRRS1-like | 180 | 358 | - | - | |
| Smso7g00130 | 391 | Pfam | Protein of unknown function (DUF568) | 85 | 183 | IPR045265 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00130 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr13:7172284 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr16:78136059 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr18:73149025 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr28:18898794 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr29:2518131 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr29:2545530 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr29:2549495 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr29:2555966 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr7:1965519 | Smso7g00130 | Smso-Chr7:2192111 | dispersed | |
| Smso | Smso-Chr7:2192111 | Smso9g00711 | Smso-Chr9:16645115 | dispersed | |
| Smso | Smso-Chr1:88252098 | Smso7g00130 | Smso-Chr7:2192111 | wgd | |
| Smso | Smso-Chr10:88739223 | Smso7g00130 | Smso-Chr7:2192111 | wgd | |
| Smso | Smso-Chr13:7047971 | Smso7g00130 | Smso-Chr7:2192111 | wgd | |
| Smso | Smso-Chr25:16813292 | Smso7g00130 | Smso-Chr7:2192111 | wgd | |
| Smso | Smso-Chr29:2498515 | Smso7g00130 | Smso-Chr7:2192111 | wgd |