AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso7g00149 ATGGTTGACGCGATCCATCACATAAGTCTTCGACTCGAAGTTATTCGAATTCTCCCCTTTCTTCTCAATATTTGCAGCAACAATTTCAGATTACTTATGGCTGCTTTCGTTGCAATTGTGTCAAGTATCTTCAGGGGTTATTGTGTGGTTTACATGAGGAGATGCGAGAGTACTCGACACTTTTATGCTTTAACCAGTGTTCAGATAGGGGATTTGCAGTCTTATCTTTCGGATCTTAGCCTTTTCCTGGCTCCTGATAGCAAGACATTCTATGTATTGGTGGATAATAGGCCATGGTTGGAAGATCTGCCCTCACGGCCTGCACACCTATGGCAGTTGATGGTTACCAAGTCAAGGATGTCCCCTTTTGCAAACACAAGAGGGCGAAAGGGGAAGAAAGATACTGCAGAGTTTGTTGAGCAGAAAGTAAGATCTAAATCTTCGAATCACTCCCAAAACTTGAAAAAATGGTTCTCAGTGGTTAATGCTGCAACACTATCAAGAAAGAGGGCTTTGTTACCTGTTAAGAAACTCAGGAGTTCCTTGCTTGCAAATAGCAAATTGCATAGAACCTTGTTTGGGTTTATTGTGTTTCAAGTGGTGTGGGAAGATGTTCGTGGTATCAATTACTTGAATGAGCTTCAGACTGATACATCTCTTGCTATAGAGGCTAAATACATGAAAAGATGGGAATTTGATAGCATAAATCAGGCAGCAAAATGCATAAATAAATGGTTTCCAGGGACACCGCGTGAATGGTATCTATTGGAAGAGCATCTCGACTCCATGCTAGGAGATGAATTCCATGATGCTTCCAGTGAATTTCCAGACAGCCACAGTACAAATAATGATGAAAAAATCTTGAATGTTGGTGCAAGTGGGCCTGATGGATCTCCCTGCACTCCTCGTTGCAATCTTCGTGAAAAAATAGAAACTTCATTAAATCAAACAAGTATACTACACACGCCCCCTCCCAGTGGACCCTATAAAAGAAGGAAACTAATGTCTCCTACAGGAATTAATATTAATTCCAGTTTTTATGCCGAAATAACTCATGGTGAAACCGTTTGCACACCAATGACTTCATCATATCCATATGATTTTGAAGAAACAACTGAACCTATGGAGTACAAGGATGTTTTGCTTTTGTTTCGGTTCAATGATCATGACCTCCCATTTGAATTACAAAAGATAATATTATCCAATTCACGATTACTGAGACTATTAGAAGCTGGACTTCCATCCTGGGTAATTTTCTGCCAATCTTATCCTGTTTTTTGTCATATTTACCGCCCATGGATGTGCCCTCTAGCTCGGGCCCTATACATAGTAATTTCCATTGTTACGGTGGTTATCGGTTTCTATGATTTGTACAAAAACGTCCCCGTGCTTAAAGCTACCGCCTCCCGTTTATGTGGACCCCTTTTTGATTGGATAGAAACATGGGAGATGGTCTCTAGAATCAAGTACTTGGGTACCATGTTGTTTTTGCATAATTCTGAGAAGGCGGTTATGTGGTTCTTGATGATGACACGTACCATTCGGTCGTTTGTTTCAGTTATCACACAGCCATTAGGGGGGCCGTTCTCTGATTTTATCGAGGTTGTTCTTCCCGTTTGGAATTTATTGATCGAAACAGGCCAATATTTATGCTCCTTTGTTTGGGTTCTGATGGAAAGTTCTTGGGACGTATTGGAGAATCTAATTGAAGTCATACTGATTCCTGTGTGGTTCATCTCTTCAGTTATTTGGACTATTGCAACAACTGTTATGTACCCGATATTTTGGTGCCTTTGGGGAATACTCTATGCTCCAGTCAGTCTCATTCTCGGTCTATCCAATTTTGTGGGATTTGTTTATAACCAAATATACGATTTAGCTCGAGACATATGGCTGTTTGCAAGTGGGATTTTCAAGTTAGCTTCAAATGCCGAGTCAGCAGTCAACACGTATGAGGTTTCTATTTGGCGGTCTCTCTGGAACGACCTCTTTTCCCAGGTTTTTCGTGCTGTTCGGAGTATTTTGAACGGATTTGTTGCATTTTTTACAGCTTGCAATAGACATCGATTAAGCATATATAATCATATACAGGAGTTCATCAGAACACTTAATCAACCAGCCCAGAGGCCAATGCCCTTGGATTCTAGCCATAGATCACAGAGATCTGGAAATCAATTGCAGGGTGAGGCTGGGGAGAGAAAGGTGCCACCTAGGAGAAACTTAAAACTGAGTTGA 2235 40.98 MVDAIHHISLRLEVIRILPFLLNICSNNFRLLMAAFVAIVSSIFRGYCVVYMRRCESTRHFYALTSVQIGDLQSYLSDLSLFLAPDSKTFYVLVDNRPWLEDLPSRPAHLWQLMVTKSRMSPFANTRGRKGKKDTAEFVEQKVRSKSSNHSQNLKKWFSVVNAATLSRKRALLPVKKLRSSLLANSKLHRTLFGFIVFQVVWEDVRGINYLNELQTDTSLAIEAKYMKRWEFDSINQAAKCINKWFPGTPREWYLLEEHLDSMLGDEFHDASSEFPDSHSTNNDEKILNVGASGPDGSPCTPRCNLREKIETSLNQTSILHTPPPSGPYKRRKLMSPTGININSSFYAEITHGETVCTPMTSSYPYDFEETTEPMEYKDVLLLFRFNDHDLPFELQKIILSNSRLLRLLEAGLPSWVIFCQSYPVFCHIYRPWMCPLARALYIVISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTIRSFVSVITQPLGGPFSDFIEVVLPVWNLLIETGQYLCSFVWVLMESSWDVLENLIEVILIPVWFISSVIWTIATTVMYPIFWCLWGILYAPVSLILGLSNFVGFVYNQIYDLARDIWLFASGIFKLASNAESAVNTYEVSIWRSLWNDLFSQVFRAVRSILNGFVAFFTACNRHRLSIYNHIQEFIRTLNQPAQRPMPLDSSHRSQRSGNQLQGEAGERKVPPRRNLKLS 744
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso7g00149 744 MobiDBLite consensus disorder prediction 708 744 - -
Smso7g00149 744 MobiDBLite consensus disorder prediction 708 727 - -
Smso7g00149 744 PANTHER OS05G0597400 PROTEIN 52 735 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso7g00149 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
147097 Smso16g01656 Smso7g00149
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr10:88433745 Smso7g00149 Smso-Chr7:2615502 dispersed
Smso Smso-Chr16:78512463 Smso7g00149 Smso-Chr7:2615502 dispersed
Smso Smso-Chr1:87576381 Smso7g00149 Smso-Chr7:2615502 dispersed
Smso Smso-Chr25:16975223 Smso7g00149 Smso-Chr7:2615502 dispersed
Smso Smso-Chr7:2615502 Smso10g03282 Smso-Chr10:87968578 dispersed
Smso Smso-Chr29:3006829 Smso7g00149 Smso-Chr7:2615502 wgd