Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso7g00157	ATGGCTTCAAGTTCTGAAATAGGGCTTGCAGCAGCTTTGAATATCCTCACTGCATTTGCATTTTTGGTAGCATTTGCTATACTTCGGATTCAGCCTCTAAACGATAGGGTTTATTTTCCGAAATGGTATTTAAAGGGGTTAAGGAACGACCCGCTGCAATCAGGTGCTTTTGTGCAAAAGTTTGTGAACTTGGATTTTAGGTCATACTTGAGGTTTCTGAACTGGATGCCTACTGCACTGCACATGCCAGAGCCTGAGCTCATTGATCATGCTGGATTGGACTCTGTTGTTTACTTGAGAATTTACCTGACAGGGCTCAAAATATTTTTTCCAATTGCATGCCTTGCTTTCACGGTCATGGTGCCAGTGAATTGGACTAATCGGACTTTGGAGCAGTCGAATTTAACATACAGTGACATAGATAAACTTTCAATATCCAACATTCCCACCGGATCAAACAGGTTCTGGACTCATTTAGTCATGGCTTACACTTTTACCTTTTGGACATGCTATATTTTAAAAAGAGAGTATGAAATAATTGCATCAATGAGGTTGCGTTTTATTGCATCAGAACAACGGCGGCCTGATCAGTTTACTGTGCTTGTGAGAAATGTGCCACCAGACCCTGATGAGACGGTCAATGAACTTGTGGAGCACTTTTTTCTGGTCAACCATCCAGATCATTATTTATCTCATCAGGTTGTTTACGATGCAAATTCACTATCCAATCTGGTAAATGAGAAGAAAACGAAGCAGAATTGGCTTGATTATTATCAACTGAAATATAACAGAAATAACCAGTCAAAAAGACCAGCAATGAAGACTGGATATCTTGGCCTGTGTGGGAAAAGCGTTGATGCTATTGATTATTATCAATCTGAGATTGAGAAACTATCGAAAGAAATATGTAAAGAGAGGGAAAAGATTACAAAAAGCACCAAGTATGTCATGCCAGCTGCATTTGTTTCTTTTAAAACACGTTGGGGGGCTGCGGTTTGTGCACAAACAGAACAATCAAGAAACCCAACTATTTGGTTAACCGAGTGGGCCCCAGAACCCCGTGATGTTTACTGGGATAATCTTGCAATTCCGTTTGTTTCACTCACAATTAGAAGACTTATAATTGCAGTTTCTTTTTTCTTCCTTACATTCTTCTTCATGATCCCAATAGCATTTGTACAGTCACTTGCAAATATTGATGGGATAGTGAAAGCAGCTCCTTTCATGCAGGGGATTTTGGAAGTGGAATTTGTAAAATCTTTTATTCAAGGTGTTCTTCCAGGAATTGCTTTGAAGATTTTCCTCATCATTCTACCTTCAATCTTGATGATGATGTCTAAATTTGAAGGATTTACCTCAATATCTGCTTTAGAGAGGAGATCTGCAACAAGATATTATATTTTCCAATTTATTAATGTTTTCCTTGGAAGCATAATTACTGGGACTGCATTTCAACAGCTAAATAACTTCATCCACCAGTCTGCAAACGATATCCCAGTGACAATTGGAGCGTCTATACCTATGAAAGCAACCTTTTTTATAACCTATATCATGGTAGATGGATGGGCTGGAGTTGCAGGAGAGATATTGAGGTTAAAACCATTAATATTTTACCACTTAAAGAATTTCTTTTTAGTAAAAACCGAAAAAGACAGAGAAGAAGCAATGGATCCTGGGAGTTTGTCTTTTAACACGGGTGAACCACAAATCCAGCTGTACTTCCTACTTGGCCTTGTTTATGCTGTTGTCACCCCGATTCTGCTTCCTTTTATAGTCGTGTTCTTTGGATTGGCTTACGTTGTATACCGTCATCAGATTATAAATGTATATAATCAGCAATACGAAAGTGCAGGAGCTTTTTGGCCCGATGTTCATGGGCGGATCATAACTGCACTGATTGTTTCACAGTTGCTTTTGATGGGCTTGCTTAGCACAAAAGAAGCTGCTCAATCAACTCCATTGCTTATTGTACTCCCGGTTTTGACCATTTGGTTTCATAGGTTCTGCAAGGGCCGGTTTGAACCCGCTTTTATTAGGTACCCTTTACAGGAGACTATGATGAGAGACACACTAGAACGCGCACGGGAGCCATGTTTAAATGTCAAGGACTACTTAGAAAATGCATACGTTCACCCAGTCTTTAATAATGAAAACACATGGGACGGGAGCGATGATGGGGTTAGTGATGATGAGTGGCCTAAAGAACCCGCTCTGGTTGCCACCAAACGTTCATCAAGAACAAACACACCAGCCCGAAGTCAACGGAGCGAGTCAACACGAACACTGTTGTGTGTTACAGATGAAAGATCTTGTCCCTAA	2319	40.06	MASSSEIGLAAALNILTAFAFLVAFAILRIQPLNDRVYFPKWYLKGLRNDPLQSGAFVQKFVNLDFRSYLRFLNWMPTALHMPEPELIDHAGLDSVVYLRIYLTGLKIFFPIACLAFTVMVPVNWTNRTLEQSNLTYSDIDKLSISNIPTGSNRFWTHLVMAYTFTFWTCYILKREYEIIASMRLRFIASEQRRPDQFTVLVRNVPPDPDETVNELVEHFFLVNHPDHYLSHQVVYDANSLSNLVNEKKTKQNWLDYYQLKYNRNNQSKRPAMKTGYLGLCGKSVDAIDYYQSEIEKLSKEICKEREKITKSTKYVMPAAFVSFKTRWGAAVCAQTEQSRNPTIWLTEWAPEPRDVYWDNLAIPFVSLTIRRLIIAVSFFFLTFFFMIPIAFVQSLANIDGIVKAAPFMQGILEVEFVKSFIQGVLPGIALKIFLIILPSILMMMSKFEGFTSISALERRSATRYYIFQFINVFLGSIITGTAFQQLNNFIHQSANDIPVTIGASIPMKATFFITYIMVDGWAGVAGEILRLKPLIFYHLKNFFLVKTEKDREEAMDPGSLSFNTGEPQIQLYFLLGLVYAVVTPILLPFIVVFFGLAYVVYRHQIINVYNQQYESAGAFWPDVHGRIITALIVSQLLLMGLLSTKEAAQSTPLLIVLPVLTIWFHRFCKGRFEPAFIRYPLQETMMRDTLERAREPCLNVKDYLENAYVHPVFNNENTWDGSDDGVSDDEWPKEPALVATKRSSRTNTPARSQRSESTRTLLCVTDERSCP	772

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso7g00157	772	Pfam	Calcium-dependent channel, 7TM region, putative phosphate	371	643	IPR003864	GO:0016020(InterPro)
	Smso7g00157	772	PANTHER	PROBABLE MEMBRANE PROTEIN DUF221-RELATED	7	725	IPR045122	GO:0005227(InterPro)\|GO:0005227(PANTHER)\|GO:0005886(PANTHER)
	Smso7g00157	772	MobiDBLite	consensus disorder prediction	741	760	-	-
	Smso7g00157	772	Pfam	Late exocytosis, associated with Golgi transport	9	176	IPR032880	-
	Smso7g00157	772	MobiDBLite	consensus disorder prediction	720	760	-	-
	Smso7g00157	772	Pfam	Cytosolic domain of 10TM putative phosphate transporter	197	360	IPR027815	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso7g00157	K21989	calcium permeable stress-gated cation channel

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr10:199621	Smso7g00157	Smso-Chr7:2804826	dispersed
	Smso	Smso-Chr10:7713834	Smso7g00157	Smso-Chr7:2804826	dispersed
	Smso	Smso-Chr19:82215958	Smso7g00157	Smso-Chr7:2804826	dispersed
	Smso	Smso-Chr20:519877	Smso7g00157	Smso-Chr7:2804826	dispersed
	Smso	Smso-Chr20:14718500	Smso7g00157	Smso-Chr7:2804826	dispersed
	Smso	Smso-Chr26:51821687	Smso7g00157	Smso-Chr7:2804826	dispersed
	Smso	Smso-Chr4:37501987	Smso7g00157	Smso-Chr7:2804826	dispersed
	Smso	Smso-Chr4:42730190	Smso7g00157	Smso-Chr7:2804826	dispersed
	Smso	Smso-Chr7:2804826	Smso9g00372	Smso-Chr9:8471898	dispersed
	Smso	Smso-Chr12:71961032	Smso7g00157	Smso-Chr7:2804826	wgd
	Smso	Smso-Chr29:3165341	Smso7g00157	Smso-Chr7:2804826	wgd