Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00166 | ATGGTAAATGCTTTCTGCTTCCCTTCTCTTTCATTTATACTTGATCGCTTGGTTTCTGTTGGACTTAAGAAGAGGAAAATCAACCAGTTGAATCAAATTGGATATGCTAGAAGAGATTATGGTGGTCTTGGTAATTTGAGGGATTCGGGTGGTGATGTTATTGCTCTAAAGAATTACATGGATGCTCAGTATTATGGTGAGATTGGTATTGGTACTCCACCTCAAAAGTTCACTGTAGCCTGCCTTGTTCACTCAAAGTACAACATGGTGAAACAAGATCTTGTTCATGAACCCGTATTTTCATTTTGGCTTAATCGCAATGCTGACGAGGATGAAGGGGGTGAACTTGTGTTTGGTGGAGTTGACAATAATCATTTCAGGGGTAGACACACATATGTCCCTGTAACTCAGAAAGGTTATTGGCAGTTTGAAATGGGTGATGTCTTGATTGGATTTTGCTCCAGTGGTTGTGCAGCAATTGCTGATTCTGGAACCTCTTTGTTGGCTGGTCCAACGGCTGTTATTACTCAAATCAATCAAGCCATTGGTGCCGCTGGTGTTGTGAGCCAACAATGCAAGACATTGATCAATCAGTATGGAAAAACTATACTTGAGATACTCATGCATGAGACACAACCTAAAAGAATCTGCTCGCAAATGAGGTTATGCTCCTTTGACGGTTCTCATGATACTAGCATGATAATTGAGAGTGTGGTTGACAAGAACAATGGAAAATCATCTGGTGTGCATGATGAGATGTGTAATCTCTGCGAGATGGCTGTTGTTTGGATGGAAACCAAAATACAGCGAAATGAAACCGAAGAACAAATAATTAACTATGCTGATCAGCTGTGTGAACGGTTGCCAAGTCCAATGGGAGAATCTGGAGTTGATTGCAATAGTCTTTCATCCATGCCCATTGTTGCTTTTACCATTGGTGGTAAAACTTTTGACCTCTCCCCTGAGCAGTATATCCTGAAAATTGGTGAGGGAGCAGCAGCACAATGCATCAGTGGATTTACTGCTCTTGATGTGGCACCTCCTCGTGGGCCCCTATGGATCTTGGGAGATATTTTTATGGGTAAATACCATACGGTGTTTGACTATGGTAAATCAAGAGTTGGGTTTGCAGAAGCAGTTTGA | 1143 | 41.64 | MVNAFCFPSLSFILDRLVSVGLKKRKINQLNQIGYARRDYGGLGNLRDSGGDVIALKNYMDAQYYGEIGIGTPPQKFTVACLVHSKYNMVKQDLVHEPVFSFWLNRNADEDEGGELVFGGVDNNHFRGRHTYVPVTQKGYWQFEMGDVLIGFCSSGCAAIADSGTSLLAGPTAVITQINQAIGAAGVVSQQCKTLINQYGKTILEILMHETQPKRICSQMRLCSFDGSHDTSMIIESVVDKNNGKSSGVHDEMCNLCEMAVVWMETKIQRNETEEQIINYADQLCERLPSPMGESGVDCNSLSSMPIVAFTIGGKTFDLSPEQYILKIGEGAAAQCISGFTALDVAPPRGPLWILGDIFMGKYHTVFDYGKSRVGFAEAV | 380 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00166 | 380 | PRINTS | Saposin signature | 251 | 273 | IPR008373 | GO:0005764(InterPro)|GO:0006665(InterPro) | |
| Smso7g00166 | 380 | PRINTS | Saposin signature | 199 | 217 | IPR008373 | GO:0005764(InterPro)|GO:0006665(InterPro) | |
| Smso7g00166 | 380 | ProSiteProfiles | Peptidase family A1 domain profile. | 1 | 377 | IPR033121 | - | |
| Smso7g00166 | 380 | ProSiteProfiles | Saposin B type domain profile. | 187 | 227 | IPR008139 | - | |
| Smso7g00166 | 380 | SUPERFAMILY | Acid proteases | 17 | 379 | IPR021109 | - | |
| Smso7g00166 | 380 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 159 | 170 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Smso7g00166 | 380 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 51 | 79 | IPR001461 | GO:0004190(InterPro)|GO:0004190(PANTHER)|GO:0006508(InterPro)|GO:0006508(PANTHER) | |
| Smso7g00166 | 380 | ProSiteProfiles | Saposin B type domain profile. | 250 | 291 | IPR008139 | - | |
| Smso7g00166 | 380 | Pfam | Saposin-like type B, region 2 | 190 | 223 | IPR008138 | - | |
| Smso7g00166 | 380 | Gene3D | Acid Proteases | 19 | 81 | IPR021109 | - | |
| Smso7g00166 | 380 | Gene3D | Acid Proteases | 83 | 120 | IPR021109 | - | |
| Smso7g00166 | 380 | Pfam | Eukaryotic aspartyl protease | 87 | 379 | IPR033121 | - | |
| Smso7g00166 | 380 | SUPERFAMILY | Saposin | 188 | 289 | IPR011001 | - | |
| Smso7g00166 | 380 | Gene3D | - | 187 | 289 | - | - | |
| Smso7g00166 | 380 | FunFam | Lysosomal aspartic protease | 80 | 185 | - | - | |
| Smso7g00166 | 380 | FunFam | Vacuolar aspartic proteinase | 252 | 379 | - | - | |
| Smso7g00166 | 380 | Gene3D | Acid Proteases | 121 | 379 | IPR021109 | - | |
| Smso7g00166 | 380 | Pfam | Saposin-like type B, region 1 | 253 | 289 | IPR007856 | GO:0006629(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00166 | K08245 | phytepsin [EC:3.4.23.40] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 148127 | Smso18g01473 | Smso7g00166 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr4:77519843 | Smso7g00166 | Smso-Chr7:2945442 | dispersed | |
| Smso | Smso-Chr7:2945442 | Smso7g01170 | Smso-Chr7:39246340 | dispersed | |
| Smso | Smso-Chr1:86845616 | Smso7g00166 | Smso-Chr7:2945442 | wgd | |
| Smso | Smso-Chr12:71736205 | Smso7g00166 | Smso-Chr7:2945442 | wgd | |
| Smso | Smso-Chr18:72507684 | Smso7g00166 | Smso-Chr7:2945442 | wgd | |
| Smso | Smso-Chr25:17533988 | Smso7g00166 | Smso-Chr7:2945442 | wgd | |
| Smso | Smso-Chr26:43023497 | Smso7g00166 | Smso-Chr7:2945442 | wgd | |
| Smso | Smso-Chr29:3299587 | Smso7g00166 | Smso-Chr7:2945442 | wgd |