Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00189 | ATGGCTTCTTCTTCTTCCGCTTGCAGTTTCATCTTCTACGCTCTATTGCTTATCCAACTTTGCAGTGCTCGTGAGATCATGGACAAGAACCAGAACAACGATCACAAAGAAGAAAATCGTATAAGTATTTATGGGAAGAATGGTGCTTCTGATTTGGATCCGGCTCTAAATGTGTTCTTTCATGTGAATGATTTATATTCTGGCAAAAAAATGCCAATTTATTTCGCGGTTAATGATCCTTCAACAACTCCTCGGTTGTTAACTAGAGAACAATCCGATTTGATACCATTTTCCTCAAAAAAACTCGCGTATCTTCTAGAATTTATATCATTAGCCGAGGGTTCGCCTCAAGCTCTAGCCATGGAGCAAACACTCAAACAGTGTGAGCTTGAGGCAACCCCTGGCGAGACCAGGTTTTGCGCTAGTTCGTTAGAGTCCATGCTGGACTCTACACGAGGGATATTGGGTATGGTCAAACTGAAAGCGTTGACCACCAATATCCGTAATTTGTCTAGTACCCTTTTGCAAGGGTACACCTTTTTGAAGGAGCCATTGGAGATCAATGTTTCTGATATGGTGGCTTGTCATACCATGGCTTATCCTTAA | 606 | 41.91 | MASSSSACSFIFYALLLIQLCSAREIMDKNQNNDHKEENRISIYGKNGASDLDPALNVFFHVNDLYSGKKMPIYFAVNDPSTTPRLLTREQSDLIPFSSKKLAYLLEFISLAEGSPQALAMEQTLKQCELEATPGETRFCASSLESMLDSTRGILGMVKLKALTTNIRNLSSTLLQGYTFLKEPLEINVSDMVACHTMAYP | 201 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00189 | 201 | SMART | BURP-2 | 57 | 201 | IPR004873 | - | |
| Smso7g00189 | 201 | Pfam | BURP domain | 58 | 201 | IPR004873 | - | |
| Smso7g00189 | 201 | ProSiteProfiles | BURP domain profile. | 59 | 201 | IPR004873 | - | |
| Smso7g00189 | 201 | PANTHER | BURP DOMAIN PROTEIN USPL1-LIKE | 37 | 201 | IPR044816 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00189 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 154175 | Smso7g00189 | Smso9g00769 | |
| 154176 | Smso7g00189 | Smso9g00770 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr7:3235190 | Smso9g00770 | Smso-Chr9:18343364 | dispersed | |
| Smso | Smso-Chr7:3235190 | Smso7g00191 | Smso-Chr7:3284334 | proximal | |
| Smso | Smso-Chr18:71764402 | Smso7g00189 | Smso-Chr7:3235190 | wgd | |
| Smso | Smso-Chr26:47413736 | Smso7g00189 | Smso-Chr7:3235190 | wgd | |
| Smso | Smso-Chr29:3622057 | Smso7g00189 | Smso-Chr7:3235190 | wgd | |
| Smso | Smso-Chr7:3235190 | Smso9g00769 | Smso-Chr9:18322230 | wgd |