Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00196 | ATGGCTGAAAATTTGATACAGAGGCTGGAGGTCGCCGTATCGCGGCTGGAATCATTCTCCCGCAGTTCTCAGCCCCAGGCTGCCGCACTTGACGCCGCATCAGCCTCATCGGAACCGTCAATCGTCGCATTTGACGATCTGATAACGGAATACGTCGACAAGGTCTCCAGCGCGGCGGAGAAGATTGGCGGACAAGTTAACGATATTACAAAGGTTCTCAGGGAGGCTTTTTCCGCTCAGAAGGCGCTTCTCGCTAAGATCAAACAAACTCAGAAACCTGATGCTGGAGGAATGGCGGAATTTCTCAGGCCAGTAAATGAAAAACTAACTGAAGCAACTAAAATGACAGAAGGACGCCGTTCTGATTTCTTTAACCACTTAAGATCTGTTGCTGAAAGTCTATCAGCTTTAGCATGGATTGCATATGCAGGGAAAAACTGTGGAATGAGCATGCCTATTGCACATGTTGAAGAATGTTGGCAGTCAGCTGAGTTTTACAATAACAAGGTTCTTGTAGAATTCAAAAATAAAGATTCAAGTCATGTGGAATGGGCAAAAGCTCTCAAGGAACTTTATGTACCAGGGTTAAGGGATTATGTTAAGAATCACTATCCTTTGGGACCCGTATGGAGTACAACAGGGGTAACTGTATCTGCCCCATCAAATGCTTCTAAACCAGGTGCTCCTGCTGCTCCAAATCCCCCACCAGCTTCACTTGCCAGCTCAGCATCTTCGTCATCATCATCTTCATCCCGTCCAACACAAGGAATGTCTGCTGTTTTTCAAGAAATTAGTTCAAAGCCCGTTACTGCTGGATTGAAAAAAGTTACAGATGATATGAAGACGAAAAACCGCACAGATAGAGCAGGATTTGTGAGCACTGGTGAAAAAGAAGCCCGCAAGAGTGTGCCATCAGCTGCTAAAGTTGGTCCTCCAAAATTTGAGCTTGTAATGGGTCGCAAATGGGTCGTTGAGAATCAAATTGGCGTGAAGGATTTGTTGATTGATGATTGTGATCCAAGGCAAACAGTTTATATTTTTGCATGCAAAGATTCAGTTCTTCAGATCAAAGGGAAAGTTAACAACATAACTGTTGACAAATGTACAAAAATGGGTGTTGACGTTGTTGCTGCTTTTGAGATTGTTAATTGCAGCGGCGTTGAGGTTCAATGCCAGGGTGCTGCCCCTACCATTTCAATAGACAACACGGCCGGTTGCACGCTGTACTTGAGCAAAGATTCTATAGAATCTTCTATCACAACTTCCAAGGCAAGTGAAGTTAATGTGATGGTACCTGCCAATGATCCTGATGCTGATCTGGCGGAACATGCTATGCCATATCAGTACATTCACACTTACCAGGACGGCCACTTTGTTACAACCCCCGTCGCCCACTCTGGAGGGTAA | 1407 | 44.99 | MAENLIQRLEVAVSRLESFSRSSQPQAAALDAASASSEPSIVAFDDLITEYVDKVSSAAEKIGGQVNDITKVLREAFSAQKALLAKIKQTQKPDAGGMAEFLRPVNEKLTEATKMTEGRRSDFFNHLRSVAESLSALAWIAYAGKNCGMSMPIAHVEECWQSAEFYNNKVLVEFKNKDSSHVEWAKALKELYVPGLRDYVKNHYPLGPVWSTTGVTVSAPSNASKPGAPAAPNPPPASLASSASSSSSSSSRPTQGMSAVFQEISSKPVTAGLKKVTDDMKTKNRTDRAGFVSTGEKEARKSVPSAAKVGPPKFELVMGRKWVVENQIGVKDLLIDDCDPRQTVYIFACKDSVLQIKGKVNNITVDKCTKMGVDVVAAFEIVNCSGVEVQCQGAAPTISIDNTAGCTLYLSKDSIESSITTSKASEVNVMVPANDPDADLAEHAMPYQYIHTYQDGHFVTTPVAHSGG | 468 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00196 | 468 | ProSiteProfiles | C-CAP-cofactor C-like domain profile. | 311 | 445 | IPR017901 | - | |
| Smso7g00196 | 468 | MobiDBLite | consensus disorder prediction | 218 | 257 | - | - | |
| Smso7g00196 | 468 | ProSitePatterns | CAP protein signature 1. | 5 | 17 | IPR018106 | - | |
| Smso7g00196 | 468 | SUPERFAMILY | C-terminal domain of adenylylcyclase associated protein | 311 | 467 | IPR036223 | - | |
| Smso7g00196 | 468 | SUPERFAMILY | N-terminal domain of adenylylcyclase associated protein, CAP | 40 | 235 | IPR036222 | - | |
| Smso7g00196 | 468 | FunFam | Adenylyl cyclase-associated protein | 40 | 215 | - | - | |
| Smso7g00196 | 468 | PANTHER | ADENYLYL CYCLASE-ASSOCIATED PROTEIN | 3 | 466 | IPR001837 | GO:0003779(InterPro)|GO:0003779(PANTHER)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER) | |
| Smso7g00196 | 468 | Pfam | CAP N-terminal conserved motif | 3 | 39 | IPR013992 | GO:0003779(InterPro)|GO:0007010(InterPro) | |
| Smso7g00196 | 468 | Gene3D | - | 310 | 467 | IPR016098 | - | |
| Smso7g00196 | 468 | FunFam | Adenylyl cyclase-associated protein | 310 | 467 | - | - | |
| Smso7g00196 | 468 | Pfam | Adenylate cyclase associated (CAP) C terminal | 311 | 465 | IPR013912 | GO:0003779(InterPro)|GO:0007010(InterPro) | |
| Smso7g00196 | 468 | Gene3D | - | 40 | 215 | IPR036222 | - | |
| Smso7g00196 | 468 | Pfam | CAP, N-terminal domain | 44 | 206 | IPR053950 | - | |
| Smso7g00196 | 468 | SMART | carp | 349 | 383 | IPR006599 | - | |
| Smso7g00196 | 468 | SMART | carp | 384 | 421 | IPR006599 | - | |
| Smso7g00196 | 468 | MobiDBLite | consensus disorder prediction | 237 | 257 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00196 | K17261 | adenylyl cyclase-associated protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 143047 | Smso10g03407 | Smso7g00196 | |
| 147044 | Smso16g01553 | Smso7g00196 | |
| 152097 | Smso24g00719 | Smso7g00196 | |
| 431898 | Smso26g02053 | Smso7g00196 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr5:16980105 | Smso7g00196 | Smso-Chr7:3341034 | dispersed | |
| Smso | Smso-Chr10:89426415 | Smso7g00196 | Smso-Chr7:3341034 | wgd | |
| Smso | Smso-Chr13:3170258 | Smso7g00196 | Smso-Chr7:3341034 | wgd | |
| Smso | Smso-Chr16:76497885 | Smso7g00196 | Smso-Chr7:3341034 | wgd | |
| Smso | Smso-Chr24:14211068 | Smso7g00196 | Smso-Chr7:3341034 | wgd | |
| Smso | Smso-Chr26:46821375 | Smso7g00196 | Smso-Chr7:3341034 | wgd | |
| Smso | Smso-Chr29:3726658 | Smso7g00196 | Smso-Chr7:3341034 | wgd |