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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso7g00217 ATGATGGTTTTGAAGACTTATATCCTAAGTTTTCTCATTGCAACCTCACTTATATCATCATCATTTGCAGCCCGTTGCGAATCGTCCATTCCAATGATGAATCTTGGTGCCAGCGATCAAGATCAGGAATCTTTATATTCAGAAGATGATCAAAGTTTAAAGAGGGATGATGATATAATTCACGAGAGGCTGCTTAAGGCTAATACAAAAGATTATGGACGATCAGATCCTGCACCAACGTTCGTCAAGCCCCCGTTTAAACTCATACCAAACTAG 276 39.49 MMVLKTYILSFLIATSLISSSFAARCESSIPMMNLGASDQDQESLYSEDDQSLKRDDDIIHERLLKANTKDYGRSDPAPTFVKPPFKLIPN 91
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso7g00217 91 MobiDBLite consensus disorder prediction 70 91 - -
Smso7g00217 91 PANTHER PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATED 2 91 IPR038974 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso7g00217 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
431887 Smso26g02017 Smso7g00217
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr13:3828837 Smso7g00217 Smso-Chr7:3803300 wgd
Smso Smso-Chr26:45265001 Smso7g00217 Smso-Chr7:3803300 wgd
Smso Smso-Chr29:4077520 Smso7g00217 Smso-Chr7:3803300 wgd