Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso7g00248	ATGCATATCCAACGACGGGATCCCCATCGACTTCGGCTGAGACGATGTTGTCCACTGAAAATCAGCTTGAGGTTTCCTGAGGTTGGAGTTCTTCCCTTGTATTCAAAGATTACGAGAACAATCTGTATGCAACTTAAGATAAGAGGTCAGAGTACATATATTGTGGGTCAGATTGCAAAGAATTCTAGGTTCATACATTCACTCAAGCAAGTTCACGCTCTCTATTGTTTTACTTGGAGCGGTCAACGGGTCAGAGCTAGCAATCAAGATATGTTAAGAATTCCCGATGCAAAGGTAATATCTTATACTGTCACACACTCCATTTCCGCCACCGCCCATTTCTCCGGCAACCAGCAAAGCTACCGCCGGTGCGACATGGCCTCTGCAAAGCCTACTGGTAGGTCGATCTCTCAACAAGCTTTCGATGAAATGGTTAAAGAAAACATAGACGATCTAGGTATGGAGCCAATGGAAGCCCTAACTGACGCCATTGAGACGTTAACTCTTCAAGGCGTAGATCTATCTGGTATTGTTACGGATACACTTCCTGGAGAAACTAATCCTGTGATCCAATCTCTTGATAGAATTAAACAGTTACAGTGCTCGGATTGGAGTGATGAAGCCGTCGTAGATGAGGTTCTAGGTTTGTTGAATACTTTGATTTCAATGTCTCGTGCTGAGGGATCCGGAAGTGCTGCAATTGCTACCAGAAACGGAGGCGTAGAGTTGATGTGTTCTGTTTGCTCGAAATTGAGCGCTGGTGGCCGTCATTCAGCACTTGTATCGGCGTTAGATGCGTTGGCTGCATTTCTTCATGATCTTCAAAGTACAGAAACTTTTAGGCAAAGTGGAGGACCGAGAATATTAATTGAGATCCTAACCAGTGGAACCCAAAATGTGAATATATTGAACAGTGGTTTTTCTGTTGTTGCTGCTGCTTCAACTGGTAATGAGGTTATTAAGGAATCTTTTGTGGAATTACACATAGATGAATTAATAGTTACAATCATGAAGAAATATAGCAAAGGGAGCATTCCCAGTTTATATGATGCCATTAGAGTGCTTTTGGCTGCTGATGATAACCGAGTAGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCTAAAATTGGAATTGCTGAAGCTCTTGTGGAGTCATTGAATGATGGAATTAGCTCACCAGGTCTTGTATCAGCAACTATTGCACTAAAAGCGGTTGCAGTGAATGATGAAATATGCAGATCAGTTGCTGAAAATGGTGGCATAGATTCATTGCTCATTTGTATTGATGAATCAGGTGTACAAGGGAATAAAGTTGTGGCTAAAGCATGCTGCTCCTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCTATTGTTGAAAGAGGAGGGTTGAATACACTCATCACACTTTCTAGCAGACTTGCTGATGACCCTTCTGTCCTCCAAGAGGTGATGACTATCATATGCACCCTGTGCCTGCGATCACCTGCAAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTGTCCAATCGATGCAAAAGTTCCCTAACTCACATCAACTGCAGAAAAATTCTTGCCTTATGATTCATAATCTTGTTGCCAGAAATCCAGAAAACAGGCCTGTGTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCCAAGGAAAACCACAAAAGCTGTAGAGATGCAGCCGTTGCTGCACTTAGAGACTTGGGGCTCGAAAACTACAATTCTTAG	1764	42.52	MHIQRRDPHRLRLRRCCPLKISLRFPEVGVLPLYSKITRTICMQLKIRGQSTYIVGQIAKNSRFIHSLKQVHALYCFTWSGQRVRASNQDMLRIPDAKVISYTVTHSISATAHFSGNQQSYRRCDMASAKPTGRSISQQAFDEMVKENIDDLGMEPMEALTDAIETLTLQGVDLSGIVTDTLPGETNPVIQSLDRIKQLQCSDWSDEAVVDEVLGLLNTLISMSRAEGSGSAAIATRNGGVELMCSVCSKLSAGGRHSALVSALDALAAFLHDLQSTETFRQSGGPRILIEILTSGTQNVNILNSGFSVVAAASTGNEVIKESFVELHIDELIVTIMKKYSKGSIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKIGIAEALVESLNDGISSPGLVSATIALKAVAVNDEICRSVAENGGIDSLLICIDESGVQGNKVVAKACCSLLSKLAGSDFNKSAIVERGGLNTLITLSSRLADDPSVLQEVMTIICTLCLRSPANASLAMEAGAGDLAVQSMQKFPNSHQLQKNSCLMIHNLVARNPENRPVLLSNGIEKIIRNAKENHKSCRDAAVAALRDLGLENYNS	587

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso7g00248	587	Gene3D	-	189	366	IPR011989	-
	Smso7g00248	587	SMART	arm-5	543	582	IPR000225	GO:0005515(InterPro)
	Smso7g00248	587	SMART	arm-5	499	541	IPR000225	GO:0005515(InterPro)
	Smso7g00248	587	SMART	arm-5	410	454	IPR000225	GO:0005515(InterPro)
	Smso7g00248	587	SMART	arm-5	455	497	IPR000225	GO:0005515(InterPro)
	Smso7g00248	587	PANTHER	UNCHARACTERIZED	130	581	-	-
	Smso7g00248	587	SUPERFAMILY	ARM repeat	201	580	IPR016024	-
	Smso7g00248	587	Gene3D	-	367	584	IPR011989	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso7g00248	K24166	armadillo repeat-containing protein 6

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr26:1363790	Smso7g00248	Smso-Chr7:4362674	transposed
	Smso	Smso-Chr29:4634677	Smso7g00248	Smso-Chr7:4362674	wgd