Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00281 | ATGGCGAGTCAGGGCATCCACGGCAACCTCCTTGAAGTCACCGTTGTTAGCTGTAGTAAACTGAAGGATACGGAATGGATTTCGAGGCAAGATCCGTACGTCGGTATCGAATACGGTAGCAGTAGATCCACCACTCGTACCTGTACAGATGGAGGCAAGAACCCTACATTCCAAGAGAAGTTCGTTTTTACCCTAATTGAAGGGTTAAGAGAGCTGAATGTTTCTGTTTGGAATAGCAATACAGTCACACATGATGATTTCATCGGCAATGGAAAGATTCCATTGGCAAAAGCTATTTCTCAAGGATTTGATGATAGTAGTTGGCCGTTACAAAGTAAAACTGGCAGGCATGCCGGAGAGGTCCGAATAATAATGCATTATACTAGTGGAAATAAACCACCTAAAGATTCTGCTCAGAAACCATCAAAAGGTTTTGCACCATCAGCACCATCATATGTAGCACATAATGCACCTCCGGCGGCGATGTACTCTACACCGCCACCGGCTTATCCTCCACCAGGTGGTGCTTATCCTCAACCGTACCCCGCCTACCCACCTCATTCCTGTGCTAATTACCCACCGGCACCTTACCCACCTCAGCACGTTACTTATCCTCCTCCGCCGTATCCCCCAAATCCAGCTTACGGATCACATTATCCCCCGCCCCCTGGTTCTCCGTTCCCCGGATTGTTTCCTCCACCACCTTATTGA | 711 | 48.1 | MASQGIHGNLLEVTVVSCSKLKDTEWISRQDPYVGIEYGSSRSTTRTCTDGGKNPTFQEKFVFTLIEGLRELNVSVWNSNTVTHDDFIGNGKIPLAKAISQGFDDSSWPLQSKTGRHAGEVRIIMHYTSGNKPPKDSAQKPSKGFAPSAPSYVAHNAPPAAMYSTPPPAYPPPGGAYPQPYPAYPPHSCANYPPAPYPPQHVTYPPPPYPPNPAYGSHYPPPPGSPFPGLFPPPPY | 236 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00281 | 236 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 8 | 130 | IPR035892 | - | |
| Smso7g00281 | 236 | MobiDBLite | consensus disorder prediction | 128 | 151 | - | - | |
| Smso7g00281 | 236 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Smso7g00281 | 236 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 1 | 233 | IPR052981 | - | |
| Smso7g00281 | 236 | MobiDBLite | consensus disorder prediction | 213 | 236 | - | - | |
| Smso7g00281 | 236 | Pfam | C2 domain | 10 | 100 | IPR000008 | - | |
| Smso7g00281 | 236 | Gene3D | C2 domain | 9 | 129 | IPR035892 | - | |
| Smso7g00281 | 236 | CDD | C2 | 11 | 108 | - | - | |
| Smso7g00281 | 236 | PRINTS | Proline rich extensin signature | 166 | 182 | - | - | |
| Smso7g00281 | 236 | PRINTS | Proline rich extensin signature | 201 | 222 | - | - | |
| Smso7g00281 | 236 | PRINTS | Proline rich extensin signature | 222 | 236 | - | - | |
| Smso7g00281 | 236 | PRINTS | Proline rich extensin signature | 148 | 160 | - | - | |
| Smso7g00281 | 236 | PRINTS | Proline rich extensin signature | 187 | 199 | - | - | |
| Smso7g00281 | 236 | SMART | C2-3c | 10 | 107 | IPR000008 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00281 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 143087 | Smso10g03468 | Smso7g00281 | |
| 147010 | Smso16g01486 | Smso7g00281 | |
| 148091 | Smso18g01291 | Smso7g00281 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr18:69300649 | Smso7g00281 | Smso-Chr7:4884612 | dispersed | |
| Smso | Smso-Chr18:69331111 | Smso7g00281 | Smso-Chr7:4884612 | dispersed | |
| Smso | Smso-Chr10:90243663 | Smso7g00281 | Smso-Chr7:4884612 | wgd | |
| Smso | Smso-Chr16:75158367 | Smso7g00281 | Smso-Chr7:4884612 | wgd | |
| Smso | Smso-Chr24:16769662 | Smso7g00281 | Smso-Chr7:4884612 | wgd |