AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso7g00350 ATGAGCTTGAATATTCCATGGACTGCAATTAGTGAGAAACTAACGACTAGAAATGATGCAACATGCTGCATGAAGTGGTACAATCAGCTGACATCGTCGCTGGTGGCTGAAAAGAAATGGTGTGATGCTGATGATTATCGAATGATTGGTGCACTTTATGAAATGGATGCTGCTTGTGTTGAAGATATTGATTGGGATAATGTTCTTGAACACAGGCCTGGTGACATTTGTCTAAAAAGATGGAATCAAATGGTGAAACACATAGGGGATTATAGGAGCAAATCATTTGGTGAACAGGTTGACATATTGGCTAAACGTTATTGCCCGGATCTGGCAGAGACTAGAGAGGTTTGGGATAACAAACCTGCTTCTCTTAAAGATGCTCTTTTTGATGAAATCAGCAATTATCAGTTGGTGCTACTTAAGCCTGTTACTAAGACACAGGTTCTTCGGATATTAAGTCCACATCACTACTCTTCTTCACGAATCAAGTTAGGGGAGTTGAAAGATAAAGAAATATATTTGACGGTGAGGATACTAGGGAGGAAGGTTCCTCCTGCATCTACATGCCGCCTTGCCCACTTCAACTCCCCACCAATCTCCGCCCTCTTCCAAATCCAGATCCAAGTCCAGATCCTGATCCCTATTCACTTCAACTTCATCTACCTTGTTAATCTAAACCCATACATCCATCTGGGTGGGTCTGTTTTCGTTCAAGATTTCACTAGTCGCCGGTTATCATATGATCTGCCTATGCATTTAAATCTCATCTCTGCTTAA 780 41.54 MSLNIPWTAISEKLTTRNDATCCMKWYNQLTSSLVAEKKWCDADDYRMIGALYEMDAACVEDIDWDNVLEHRPGDICLKRWNQMVKHIGDYRSKSFGEQVDILAKRYCPDLAETREVWDNKPASLKDALFDEISNYQLVLLKPVTKTQVLRILSPHHYSSSRIKLGELKDKEIYLTVRILGRKVPPASTCRLAHFNSPPISALFQIQIQVQILIPIHFNFIYLVNLNPYIHLGGSVFVQDFTSRRLSYDLPMHLNLISA 259
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso7g00350 259 PANTHER GB|AAC33480.1 4 123 - -
Smso7g00350 259 SUPERFAMILY Homeodomain-like 10 93 IPR009057 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso7g00350 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr7:5816959 Smso7g00350 Smso-Chr7:5829906 proximal
Smso Smso-Chr29:5965362 Smso7g00350 Smso-Chr7:5829906 wgd