AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso7g00389 ATGGCGGATCATAAGAGAAAGAAGAAGAGAGGGAGAAGCAAGCTTTTCAGGTCTTGCTTTCGGTCTTTCACCGCCGACGAAAGACCGTTTTCAAAAGATAAATCAGATCGCCGGGATTCCAAAAGCGGACGGTTAGGAAAACCGGTTTTGATGGCAATAACTGGATGCGAAGGAGAAGACTCCATTCCGGATGTCAATTTGGTTAACGATTCCGTCACCGGCGGTTATCGCTCCGCCGAACGATCTTCTAATGGCCGAGGCATCTCTCGTTTGCTTAAAGCCGTTTTGTTTGACTCCGTGATGGTTAGTTATTCATTCGTTTCTGCAAACCGCTTCGTTTTTTCTGTTGAAATCGTTGCAATTTCTGATGAAGTCGTTTCAATTTCTATTGAAATCGTTGAAAGTTCATCTTCTAGATCTTCTGAATTGATAGAGAGATTCATAATTTCGGAGTCATTTCTATCAATCGAGAAATCCGGTAAGCCATCGGAAGACAGTAATGCGTCCCGTAGGGAACCATCGACGGACGTGGAGGATTCATCTGGTCGTTGTTACAATTTATTATCGTCTTCTTCACGAACCACCAGTTCTTCATACTCGAGTTCTTCCTCTTCGTCCACAAACTCCAATTCTCGGTGGCTATCTGAACCAAAAACATCATCTCCATCACATTTAGCAGATTCTACTCATCCGATTTCATCCATTTCGTCATCCAGTTCTCGATCATGTTTTGACCAAAAATCATCATCACAAACAGATTCAATCCATCCGAATCGTCAAAATACATCTATCTCGTCATTAGCGAAATCAAATTCTCTTCCTCGATCATCATCATACCACAAACAATTATCACAATCAGATTCAGTCGATCCAAGCAGTTCAGTTTCACCTAATTCTGACAAAATCAAATCCGGATGCAACAATTGGAACATGAACATCCGTTGGTGCTTGTTTCTTCTGTTAAGCCTCATTGTGTTGGTGATCTACGGAAGGATATACTCCATACTGTGCACATCAACTTGGTTGTACCTGGTGCCTTGTCGACTGGTCAAACGAGTCAACTCAGTTACCAACACGGCCAGGTTAATGGATACCGAGTCGGAGCAGTATAAGAAAAGAGTAATTATGGCCGGTTTGCTTGACCGAACACGTAATCCCCTCCGGTAG 1167 42.93 MADHKRKKKRGRSKLFRSCFRSFTADERPFSKDKSDRRDSKSGRLGKPVLMAITGCEGEDSIPDVNLVNDSVTGGYRSAERSSNGRGISRLLKAVLFDSVMVSYSFVSANRFVFSVEIVAISDEVVSISIEIVESSSSRSSELIERFIISESFLSIEKSGKPSEDSNASRREPSTDVEDSSGRCYNLLSSSSRTTSSSYSSSSSSSTNSNSRWLSEPKTSSPSHLADSTHPISSISSSSSRSCFDQKSSSQTDSIHPNRQNTSISSLAKSNSLPRSSSYHKQLSQSDSVDPSSSVSPNSDKIKSGCNNWNMNIRWCLFLLLSLIVLVIYGRIYSILCTSTWLYLVPCRLVKRVNSVTNTARLMDTESEQYKKRVIMAGLLDRTRNPLR 388
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso7g00389 388 MobiDBLite consensus disorder prediction 179 300 - -
Smso7g00389 388 MobiDBLite consensus disorder prediction 158 300 - -
Smso7g00389 388 PANTHER OS07G0553800 PROTEIN 227 385 IPR040411 -
Smso7g00389 388 MobiDBLite consensus disorder prediction 163 178 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso7g00389 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr6:5295546 Smso7g00389 Smso-Chr7:6351194 dispersed
Smso Smso-Chr29:6453536 Smso7g00389 Smso-Chr7:6351194 wgd