Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso7g00443	ATGACAAAGCCCCCTATCCCTTCTCTCCCACACGTGAGGCACGTGCCATCGAGATTTTTTCTTTCCTTCCACCGTTATATATACCCCACCGCCTATGACACACTTCACTCACCTTCTACACAAACACCAATCTCTGTAACAATGGCGTCCATGGCTGCAACCTTTGCCTCACCTCTTTCCACCAAGACCAAGACCTGTTTCTTAGATCAATCATCCTTCCATGGCGTTCCGGTCTCTTCTCCGATCCGGATCCAATCAGTCAAATCGAGCAAGAACATGCCGATTACCATGTCCGCCGCTCCGTATGATCTCGGATCCTTCACCTTTCAACCGATCAAAGAATCGATCGTGTCTCGTGAAATGACCAGAAGGTACATGACCGACATGATTACGTACGCCGATACCGACGTCGTTATAGTCGGTGCTGGCTCCGCTGGTCTATCATGCGCCTACGAGCTTAGCAAAAACCCTAACGTTCAGGTAGCCATCATCGAACAGTCTGTGAGCCCTGGTGGTGGAGCATGGCTCGGAGGACAACTGTTTTCCGCCATGGTTGTCCGCAAACCAGCACACCACTTCCTCGACGAGCTTGAGATCGAGTACGACGAGCAAGAAGACTATGTCGTCATCAAACATGCCGCTCTGTTCACATCCACCATCATGAGCAAGCTTCTGGCCAGGCCAAATGTGAAGCTCTTCAACGCGGTTGCTGCAGAGGACTTGATCATCAAAGGAGGAAGAGTAGGTGGTGTTGTGACCAACTGGGCTTTGGTGTCGATGAACCATGACACACAGTCGTGCATGGACCCGAATGTGATGGAGGCAAAGGTGGTTGTGAGCTCATGTGGTCATGATGGTCCGATGGGCGCGACAGGGGTGAAGCGGCTTAGGAGCGTTGGGATGATCGAGAGTGTTCCGGGGATGAAAGCTCTTGACATGAACACTGCTGAGGATGAAATTGTGAAGATGACAAGAGAGGTGGTTCCGGGAATGATTGTCACCGGAATGGAAGTTGCCGAGATTGATGGATCTCCGAGAATGGGACCAACATTTGGGGCTATGATGATATCTGGACAGAAGGCGGCTCATTTGGCGTTGAAGGCGTTGGGGCTACCAAATGCTCTGGACGGAACGGGTGTCGGAAGCATGCAGCCGGAGCTGATCCTTGCCGCTGCTGATTCCGGTGAGACGGTGGATGCCTAA	1203	52.04	MTKPPIPSLPHVRHVPSRFFLSFHRYIYPTAYDTLHSPSTQTPISVTMASMAATFASPLSTKTKTCFLDQSSFHGVPVSSPIRIQSVKSSKNMPITMSAAPYDLGSFTFQPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNTAEDEIVKMTREVVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTGVGSMQPELILAAADSGETVDA	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso7g00443	400	PANTHER	THIAMINE THIAZOLE SYNTHASE	56	399	-	-
	Smso7g00443	400	Pfam	Thi4 family	118	351	-	-
	Smso7g00443	400	Hamap	Thiamine thiazole synthase, chloroplastic [THI4].	49	378	IPR027495	GO:0009228(InterPro)
	Smso7g00443	400	Gene3D	-	134	369	IPR036188	-
	Smso7g00443	400	Gene3D	-	103	133	-	-
	Smso7g00443	400	SUPERFAMILY	FAD-NAD(P)-binding domain	100	362	IPR036188	-
	Smso7g00443	400	FunFam	Thiamine thiazole synthase, chloroplastic	134	369	-	-
	Smso7g00443	400	NCBIfam	sulfide-dependent adenosine diphosphate thiazole synthase	114	369	IPR002922	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso7g00443	K03146	cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	337117	Smso29g00581	Smso7g00443
	353818	Smso7g00443	Smso29g00581

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	4951456	Smso	Smso13g00361	Smso-Chr13:47917018	Smso7g00443	Smso-Chr7:7556418
	5096965	Smso	Smso29g00581	Smso-Chr29:8488106	Smso7g00443	Smso-Chr7:7556418