Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00458 | ATGCATGATTTTTGCTTTACAATCCCGTATGGGATGATAGTGTTCTGTGGTGGGATAATTGGGTTTGCAAGAAAAGGGAGCACGACCTCGTTGGCTGGTGGTGTGGGCACTGGATTATTGCTCTTCCTCGCTTCGTATCTAACTCTCAGTGCCTTCCACAAGCGAAAGAACTCATGGTTTGGATTGATTCTTGAAACTGTTTGTGCTGCTGCACTCACATGGGTTATGGGACAGCGATACACCGAGACTGGTAAAATAATGCCTGCAGGTCTTGTTGCTGGTATCAGTGGAGTGATGACAGCATTTTATCTGTACAAGATAGCCACCGGTGGTAACCATTTTCCCGCCAAAACTGAATGA | 360 | 46.11 | MHDFCFTIPYGMIVFCGGIIGFARKGSTTSLAGGVGTGLLLFLASYLTLSAFHKRKNSWFGLILETVCAAALTWVMGQRYTETGKIMPAGLVAGISGVMTAFYLYKIATGGNHFPAKTE | 119 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00458 | 119 | Gene3D | - | 1 | 111 | IPR044890 | - | |
| Smso7g00458 | 119 | Pfam | Transmembrane proteins 14C | 6 | 103 | IPR005349 | GO:0016020(InterPro) | |
| Smso7g00458 | 119 | PANTHER | TRANSMEMBRANE PROTEIN 14, 15 | 1 | 108 | IPR005349 | GO:0009706(PANTHER)|GO:0015245(PANTHER)|GO:0015908(PANTHER)|GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00458 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 337130 | Smso29g00606 | Smso7g00458 | |
| 353831 | Smso7g00458 | Smso29g00606 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4997044 | Smso | Smso7g00458 | Smso-Chr7:7742220 | Smso8g00912 | Smso-Chr8:15052616 | |
| 5096977 | Smso | Smso29g00606 | Smso-Chr29:8747048 | Smso7g00458 | Smso-Chr7:7742220 |