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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso7g00506 ATGGTCACCGACGTAACTTATCTGTGTTCGGTGATGAACCAACAGCAAGCGATAATGAACGATTCCAAATCAACGGCTCTAATTACTCGTGATTTACTCGGAGGCGGTGCTGGCTCCGACCTTGACTCCTCAAAGGAACTAGACCTCGACTTACACGTTCCGTCAGGATTCGAAAAACGTCTCGATTTGAAGTCAGGAAAAGTTTATCTCCAGAGATGCAAATCACCAAACGTAAACACATCATCTTCATCATCTGATCAAACAGTTTCAAAGCTGCAGGACCTTAACTTCCCTCTGTCGTCGAAAAAGCCGTTGAATCTCTTCGATGATGCAAGTTTAGATCTGAATCTCGTCAGTTTATCATCCTCACCTCCGGCTTACAGAAGTGTTTGCACTCTGGATAAAGTGAAATCCGCTCTGGAACGAGCAGAACGTGAAAGGATTCAGAAACGAGCTATTTCTGTCCCGAAATCATGTTCTTCGAATTCTTCGTCTTCTGTTAAGGAAACAATGGTTATTGAGGATGATGGTGGTGATGGTGATCAATCTTCTCAAGCGTATGCGGCTGGGTGTCCGAGTTGCTTGCTGTATGTGCTTATATCGCGAAGCAACCCTCGATGTCCTCGGTGCAACATGACCGTGCCGTCCCCTACGGCCATGAAGAAACCGAGAATTGATCTTAACATCTCCATTTGA 696 45.4 MVTDVTYLCSVMNQQQAIMNDSKSTALITRDLLGGGAGSDLDSSKELDLDLHVPSGFEKRLDLKSGKVYLQRCKSPNVNTSSSSSDQTVSKLQDLNFPLSSKKPLNLFDDASLDLNLVSLSSSPPAYRSVCTLDKVKSALERAERERIQKRAISVPKSCSSNSSSSVKETMVIEDDGGDGDQSSQAYAAGCPSCLLYVLISRSNPRCPRCNMTVPSPTAMKKPRIDLNISI 231
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso7g00506 231 PANTHER PUTATIVE-RELATED 45 229 - -
Smso7g00506 231 Coils Coil 133 153 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso7g00506 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
148290 Smso18g01850 Smso7g00506
154195 Smso7g00506 Smso9g00505
154196 Smso7g00506 Smso9g00517
337156 Smso29g00657 Smso7g00506
353857 Smso7g00506 Smso29g00657
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr2:4447572 Smso7g00506 Smso-Chr7:8385931 dispersed
Smso Smso-Chr3:116237110 Smso7g00506 Smso-Chr7:8385931 dispersed
Smso Smso-Chr18:76961910 Smso7g00506 Smso-Chr7:8385931 wgd
Smso Smso-Chr29:9280163 Smso7g00506 Smso-Chr7:8385931 wgd
Smso Smso-Chr7:8385931 Smso9g00505 Smso-Chr9:11381451 wgd