Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00616 | ATGACCGGCGGCGGCGACTGCGAAACTAGGGTTTCGATTCCGAACGCTGCTCGGAAGGCAATTCAAGAAGTCACGAAGAGCCTACGATACAAGCACTGCGATGAGTTCGTGTACACAACGCTCAATGACTCCGGTATGGATCCTACCGAAGCTGGCCGGAGATTGAAGATGATTCATGATATCAGAGAGATCGCCGGAAAGCACAGCGTAGAGGACGTGTATACAATGCTCAAAGAATGCAACCTGGATGCTAATGAAGCTGCTCAGAGGCTATTGTATATCGATACTTTCCATGTGGTTAAAAAGAAACATGACCGGAGGAAAATGATAACCAGTGATGCCTCTCAAGAGAATAAACAGACACGGGGAAATCAATGGAGGGGAGATAAGGGTGGGCGAGGGACTTTCTATTTATCAAAAGTTTTTGAAGATGTTGGAGGTGGAAGAAATTTGAGTTCAGGGAAGGAATACGGTGTTACTAATCGCATAGAGAGGGTTTCGGGGCCATCTTTGCCAGGCAATATGGGAAAAGAGAACAACGTAGTACACGTGTCAAATTCTTGTGCCAATGCTAATGGTACACCGGCTATATCCAATGGGAGTTACAATCAAAAGCTTGCATCCGAACCATCTGCAGATGTCGCATCCTCTACTTCAGATCATGTTGTGGTTTCATCTCAGAACACAAAGCACATGTGTGCTGTGGGTACAATAAAATGTGAGATTGTAAAACGTAGTGGTTCTGATGATTCAAATGCAAGAATTCCAGCTGGCATGAAGTTTAGTGCTGATCAGTTAGGTATTGGCACCATTACAGTTATTGCAGAAGCTGCAGATTCTGACCTAAAATCCGATGTAGCTGAAAAGAATCAGATCTCAGAGTCTTTGCAGCCTCTTTTGTTGTCAACCCAAAACAGTTCACAGGTTGTCAATCCTATTCAGGATAGCGAGCAGCCTCCTCAATTATTAAACGAGCCTCTAAAAGTGAATGCTTCCGAGCATACATATTCGGTTTCTGAAGAAGAATCTGAATCGAATATATCAACTCCAAAACTTGATGTGATGACAGAGAAATTGACTTTATCTTCTCACCAAGCTGTTATTTTCCCTGATCATCTACAAGTCCCTGAAAATTATAAATGTCAATTCGTATTTGGAAGTTTGGATGCTACTCCTGATGATTGCAAACCTATATCCGTGACTGGATCTACTCAGCAAAATGAAGTTGTAAAAGAACATTCTTCGAGCAACGAAAATGTTTCTATAATAGCCCAGGAAGATGAAAATCAAGATCATGTTTCTGAAGATATATTACCTTCAGATGATAACATCTCATCTGATGCTTCTGCCCAAAAACACGAGCAGACAAAGGCGGAGATAATCCCCCCTCTCCCTTCAACAGGGTTTCAGAATCTTCCAGTTCTTCAAACTACCAGGGACTACAGTTATGGTTATATGCCATCTCTGATGGGCCCACATTTTGTACAACTTGATATACCTGAGCTACAGAATGGGAACTCTCAAGTTGTAGCTGCAGCGAGCCAACCTCCTGTAACACAACCTGCAATCGCGGGCCAGAGTTCTATAGCATTATCTCCACCTCTGTTTCCATATTTCAGACCATATCCAAATTACATTCCTTATAATCCATATTTCCCACATATGTATTTGCCACAAAATGCTCACTTGTTTAACCATGGGGTTTTCCCTCAGCCACCACCACCTACAGGCAATGTTCACCATTTGCAGGCGGCGGCGGCAGCAGGGGTGAAATCACCTACTCCTTCACAGAACAAACAGGGAAATAATGAAGATATTGCTACATCTGAAGCAAAAGTTAACAATATTCAGTCAACGGTTCAACAGGGTGAAGATCCACAAGCTTGGGCTCGTGCACCCGTCCATGATATACCTACCTTATTGCCAAACTATTTCTACAACTTTCCTCAAGGACCACACATGGCGGCCTTTTCACCTTTACAAGCTGCTGCTCTCTATCATTCTTCGCAAACAATGACCGCTCAATCTACCATACAACCGCCACTCATGTGTCAACCACAACCCACAGGCGCCACGGTTGAACCCCTGGTCCAATCATCCGCTTCTTACCATCAACATCAGCATGCACCACAGGTAAACATGAACGACACTGCTGTAGTGAACATGGGGACTGGTTGA | 2178 | 43.76 | MTGGGDCETRVSIPNAARKAIQEVTKSLRYKHCDEFVYTTLNDSGMDPTEAGRRLKMIHDIREIAGKHSVEDVYTMLKECNLDANEAAQRLLYIDTFHVVKKKHDRRKMITSDASQENKQTRGNQWRGDKGGRGTFYLSKVFEDVGGGRNLSSGKEYGVTNRIERVSGPSLPGNMGKENNVVHVSNSCANANGTPAISNGSYNQKLASEPSADVASSTSDHVVVSSQNTKHMCAVGTIKCEIVKRSGSDDSNARIPAGMKFSADQLGIGTITVIAEAADSDLKSDVAEKNQISESLQPLLLSTQNSSQVVNPIQDSEQPPQLLNEPLKVNASEHTYSVSEEESESNISTPKLDVMTEKLTLSSHQAVIFPDHLQVPENYKCQFVFGSLDATPDDCKPISVTGSTQQNEVVKEHSSSNENVSIIAQEDENQDHVSEDILPSDDNISSDASAQKHEQTKAEIIPPLPSTGFQNLPVLQTTRDYSYGYMPSLMGPHFVQLDIPELQNGNSQVVAAASQPPVTQPAIAGQSSIALSPPLFPYFRPYPNYIPYNPYFPHMYLPQNAHLFNHGVFPQPPPPTGNVHHLQAAAAAGVKSPTPSQNKQGNNEDIATSEAKVNNIQSTVQQGEDPQAWARAPVHDIPTLLPNYFYNFPQGPHMAAFSPLQAAALYHSSQTMTAQSTIQPPLMCQPQPTGATVEPLVQSSASYHQHQHAPQVNMNDTAVVNMGTG | 725 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00616 | 725 | Pfam | GBF-interacting protein 1 N-terminal | 56 | 108 | IPR009719 | - | |
| Smso7g00616 | 725 | MobiDBLite | consensus disorder prediction | 108 | 131 | - | - | |
| Smso7g00616 | 725 | PANTHER | FLOCCULATION PROTEIN (DUF1296) | 602 | 715 | IPR044277 | GO:0051082(PANTHER) | |
| Smso7g00616 | 725 | MobiDBLite | consensus disorder prediction | 426 | 453 | - | - | |
| Smso7g00616 | 725 | SUPERFAMILY | UBA-like | 56 | 108 | IPR009060 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00616 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 337206 | Smso29g00761 | Smso7g00616 | |
| 353906 | Smso7g00616 | Smso29g00761 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr29:11284570 | Smso7g00616 | Smso-Chr7:10664062 | wgd |