Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca1g02948	ATGTCGGTAACCGCTATTTCGGGCACGACAAATAGTAGTGTGTGTAGTGGGTGCGCCAATGCTTCAAACAGAAGTTGTTTGAGAAACAGAAAAAGCCAGATGATGTTTGGGACTGAAAAAGCGTTCCTTCCGCATCAATGTGTACGGAATGTAGTGTTTACGGGCCATCGATCAGATGTGTCTGGACAACGGGGTATGAGGGTTGAAGCGGGTTGGCTTTTTAAAGGTGGAGGAGGTGACCAGGCTTCTGAAGCGAGTTTAGAGCGTAGTGAAAGTGCTAACGAAGATATTTTGATTTTCTTTTATCAGTTGGATTTGGCTACTAGAGTGCAGTATGCTTTGAATTTGGAGGAGTATGATATTGCAAAACAATTGAGAAACAAGCTCAATGAGGTCGAAGCAGAAGTTATCAAGCAGCAAGAAACAAAGAGAGGGTTATCTTCAAAAAGTGAAGCTCAAGACAAGGGTATAAGTTTGTTGCGTTTGCGAGCAGACCTGCAGAATGCAATAGAGAATGAGAACTATGCAATGGCAGCTGAAATACGTGATCAGATTTCCAAGCTAGAAGCAGATTCGTTGGCTGCGTCAATAAAAGCCCAAGCCTTTGAAAAAGCTCATTTTGAGTTCCGTTTAGGCCAGAAAGTGAGGCACAAAAAGTTTGGATACAGAGCCGTGATTTGTGGAATGGATCCAGTATGCTGTGAAACAAGTTTGTGGATGGAAAATGCACAGGTTGACCAGTTGACTCGTGGTCCTGATCAGCCGTATTATCAGGTTTTGGTTGATGTACATGAAGACCCCAATCTATTGGTAGCATATGTTCCAGAAGAAAATTTACTGGCTCCAGAAGAACCGGATAAGGCTAGATTTGATCATCCGTACACTTCCTTCTTATTCTATGGTATGGATTCAGCTGGAGACTTTATTCCTGTGAAGCAGCTGCGTGAGAAGTACAATAGACCTAGACATGAGGTGCCATATGATCCACAGGATGATGTTTGA	1002	43.01	MSVTAISGTTNSSVCSGCANASNRSCLRNRKSQMMFGTEKAFLPHQCVRNVVFTGHRSDVSGQRGMRVEAGWLFKGGGGDQASEASLERSESANEDILIFFYQLDLATRVQYALNLEEYDIAKQLRNKLNEVEAEVIKQQETKRGLSSKSEAQDKGISLLRLRADLQNAIENENYAMAAEIRDQISKLEADSLAASIKAQAFEKAHFEFRLGQKVRHKKFGYRAVICGMDPVCCETSLWMENAQVDQLTRGPDQPYYQVLVDVHEDPNLLVAYVPEENLLAPEEPDKARFDHPYTSFLFYGMDSAGDFIPVKQLREKYNRPRHEVPYDPQDDV	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca1g02948	333	Coils	Coil	115	149	-	-
	Soca1g02948	333	Gene3D	-	205	307	IPR036623	GO:0003677(InterPro)
	Soca1g02948	333	Pfam	Hemimethylated DNA-binding protein YccV like	208	304	IPR011722	GO:0003677(InterPro)
	Soca1g02948	333	SUPERFAMILY	YccV-like	207	304	IPR036623	GO:0003677(InterPro)
	Soca1g02948	333	PANTHER	YCCV-LIKE DOMAIN-CONTAINING PROTEIN	11	332	IPR053189	-
	Soca1g02948	333	Pfam	UvrB-uvrC motif	161	190	IPR001943	GO:0005515(InterPro)
	Soca1g02948	333	NCBIfam	heat shock protein HspQ	207	308	IPR011722	GO:0003677(InterPro)
	Soca1g02948	333	SMART	YccV-like-2-a	206	310	IPR011722	GO:0003677(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca1g02948	-	-