AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca1g02976 ATGGAGTTCTGGGTGGTTGCAGCGGCTACGGGTGCTGGTTATGTGGCCAAACACTGGCAGAACTTATCAGGGGGAAAAAATAACCCGTCGAAGCTATCGCCTGTGTCATCACCACGAGTGCAGCCAGACACATGCCGACTTTTGGGTGAATTGCCCGACTCTGTTTTCCCATTGCCAAAGTTAGCAAAAAGATGTTTGTTGGAAGGAGATGTTTCTTCACCAGAGGATGGAGATAATAAAATGCGGATGAATCTTCAAGGTAACACAGATGAAATCACTGGAAAACATGAGTACTGTGACGCTTCTGGCCATTATCTACACGAATTCAGAACCAAGAACTCGAATAGAAAATCTTGGTCGAGCCTAAGACCCTTGGTGGTAACCAGTAATAGCATTGATTTTCAAAGAAAATTGACGACACAGGCTGATGATGTAATGGATCATAAGATCATGTTTATGGAAGAAAATGGAGGATCTACTGAAGCAAAATTATATGAACCAACCGGATTAGTGAAACTTCCAAGAAGACCAGAACAAAAATATGTCAAGAATATTGAAACAAGAGATCTTCGTTCAAAAGACAACGACATGGTGTCCTTGTTCCTTGGGATTACAATCGGCATATTGTCAAGTACTGTGACAAATCAACATGAAGCTGAGTATTTAAATGAGTTGCTAGAACAAGCTGAGATTATGGTTCAAGATTTACACAAGAAACTTGAAATAAAAGATGGGTTTACCAGAAAAGAGCATGGCACCGAGGCAGATGGAACTTCAACAGATGACTCAAACACTGATAAGTATGAGTTAACGAGTGACATCGAGGCAGAGCTCGAGGCTGAGCTTGAGAAGTTGGAAGAAAATATTAAGGATTGCAACCTGCAAAGATTGTCTAATATAGGGGAGATAGATTCAGACTTTGAAGCAGACATGGCTAGGGGAGACTTAAACATAGATTCACTCAGCTGGCAACTTGATAGCCAATCTGAATCAGACCATGATGACAAAAGGGTAAAAAGTGAAAGCACCGGGAAGGCTATGTTCACTCCAAATTACACTGTTTCATCACTGGATCTACGGTTACGTCTTCATGAAGTAATAGAGTCAGAACTCAAAGGACGTATTGAGGAGCTGGAGGCAGTTCTCAAGTATCGAAACAGCCAAAGTAAGCCTCATTCACCAGAACCACAAGAAGAAAGCTCTTTCTGGGACTTTGACCACACGAGGATTGAATCTTCTTCATCAACCCCTTAA 1254 41.71 MEFWVVAAATGAGYVAKHWQNLSGGKNNPSKLSPVSSPRVQPDTCRLLGELPDSVFPLPKLAKRCLLEGDVSSPEDGDNKMRMNLQGNTDEITGKHEYCDASGHYLHEFRTKNSNRKSWSSLRPLVVTSNSIDFQRKLTTQADDVMDHKIMFMEENGGSTEAKLYEPTGLVKLPRRPEQKYVKNIETRDLRSKDNDMVSLFLGITIGILSSTVTNQHEAEYLNELLEQAEIMVQDLHKKLEIKDGFTRKEHGTEADGTSTDDSNTDKYELTSDIEAELEAELEKLEENIKDCNLQRLSNIGEIDSDFEADMARGDLNIDSLSWQLDSQSESDHDDKRVKSESTGKAMFTPNYTVSSLDLRLRLHEVIESELKGRIEELEAVLKYRNSQSKPHSPEPQEESSFWDFDHTRIESSSSTP 417
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca1g02976 417 Coils Coil 219 239 - -
Soca1g02976 417 MobiDBLite consensus disorder prediction 385 417 - -
Soca1g02976 417 Coils Coil 268 295 - -
Soca1g02976 417 PANTHER EMB|CAB62613.1 1 395 IPR040348 GO:0008356(InterPro)
Soca1g02976 417 MobiDBLite consensus disorder prediction 249 268 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca1g02976 - -