Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca4g03379	ATGGAAATGCAAAACGACTTTGATCGCCTTCTTTTCTTCGAACACGCTCGCCGTAACGCCGAAGTCACTTATGCCAAAAATCCTCTTGATTCCGAGAATTTAACTAGATGGGGAGGGGCGTTACTTGAACTATCTACTTTCCAGAGTGTTCAGGATTCTAAATCTATGATTGAAGATGCTATATCGAAATTGGATGAAGCGTTAACGATTAATCCGAAGAAGCATGATGCATTGTGGTGTATGGGGAATGCAAAAACATCTTATGCTTTTTTGACCCCTGATAAAGATGAAGCTAAGCCTTACTTTGATTCCGCTTATACTTACTTTCAGCAGGCCGTTGATGAGGAACCAGGGAATGAACTTTACCGCAAGTCATATGAAGTGGCTACAAAGGCTCCCGAATTACACTCAGAGCTCCATAAACAGGGGTTTAGTCAACAAGCTATGGGACCAGGGGCAGGTGCCGGGGCAGGTCCTTCAACTTCTTCTAGTGTCAAGGGTCCCAAGACACAAAAGAGCAGCGATCTGAAGTATGATATATTTGGATGGGTAATTCTTGCTGCTACTATTGTGGCATGGGTTGGATTTGCGAAAGCAAATGTACCTTCACCACCTCCCCGATAA	624	43.91	MEMQNDFDRLLFFEHARRNAEVTYAKNPLDSENLTRWGGALLELSTFQSVQDSKSMIEDAISKLDEALTINPKKHDALWCMGNAKTSYAFLTPDKDEAKPYFDSAYTYFQQAVDEEPGNELYRKSYEVATKAPELHSELHKQGFSQQAMGPGAGAGAGPSTSSSVKGPKTQKSSDLKYDIFGWVILAATIVAWVGFAKANVPSPPPR	207

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca4g03379	207	Pfam	Plant specific mitochondrial import receptor subunit TOM20	7	198	-	-
	Soca4g03379	207	MobiDBLite	consensus disorder prediction	157	171	-	-
	Soca4g03379	207	MobiDBLite	consensus disorder prediction	146	172	-	-
	Soca4g03379	207	Gene3D	Tetratricopeptide repeat domain	1	149	IPR011990	GO:0005515(InterPro)
	Soca4g03379	207	PANTHER	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED	1	206	IPR010547	GO:0005742(InterPro)\|GO:0045040(InterPro)
	Soca4g03379	207	SUPERFAMILY	TPR-like	13	126	IPR011990	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca4g03379	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	156059	Soca3g01547	Soca4g03379
	156598	Soca4g03379	Soca9g04690

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr4:64202969	Soca9g04690	Soca-Chr9:66172601	dispersed
	Soca	Soca-Chr3:15329127	Soca4g03379	Soca-Chr4:64202969	wgd
	Soca	Soca-Chr4:64202969	Soca4g04451	Soca-Chr4:75781895	wgd