Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca4g03380	ATGCCTTCAATACGCGAAGAAGAAGAGCCACTTCTAACACCAAACCCAGACAGATTCTGCATGTTTCCAATCCAATACCCACAAATTTGGGAAATGTACAAAAAAGCCGAAGCCTCATTTTGGACAGCAGAAGAAGTCGATTTATCGCAAGACCAACGTCATTGGGACTCGTTAACAGACGGCGAACGTCACTTCATTACTCACGTTCTCGCATTCTTTGCTGCATCAGATGGAATTGTTTTGGAAAATTTGGCTGGAAGGTTTATGAAAGAGATACAGATCGCCGAAGCACGCGCTTTTTATGGGTTTCAGATTGCCATTGAGAATATTCATTCCGAAATGTATAGCTTGCTTTTGGAATCTTATATTAAGGATTCCAATGAAAAGAATAGGCTGTTTCGTGCTATTGAAACTATTCCGTGTGTTGAAAAGAAGGCCAATTGGGCGCTCAAGTGGATTGATGGGTCGGAATCGTTTGCAGAACGAATCATCGCTTTTGCTTGTGTTGAAGGCATATTCTTTTCTGGAAGCTTTTGCGCGATATTTTGGTTAAAGAAGCGGGGATTGATGCCAGGACTAACATTCTCCAACGAATTGATTTCACGAGACGAAGGACTACATTGTGACTTTGCTTGTTTGTTATACAAACTACTAAACAACAAACTAAGTGAAGAACGTGTTAAAGGCATTGTTTGTGATGCAGTTGAGATCGAGAGGGAGTTTGTGTGCGACGCATTACCTTGCGCACTTGTTGGAATGAATGGTGGTCTTATGAGTCAATACATTGAGTTTGTGGCGGATAGATTGCTGGGAGAATTGGGATATCCCAAAATGTATGATGCTCAGAATCCGTTTGATTGGATGGAGTTAATTTCGTTACAAGGGAAGACTAATTTCTTCGAAAAGAGAGTCGGGGAGTATCAGAGAGCTTCTGTGATGTCGAATTTGAATGGATATGGGAGTGATTCCCATGTTTTCAAAATGGATGAAGATTTTTGA	999	41.04	MPSIREEEEPLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDQRHWDSLTDGERHFITHVLAFFAASDGIVLENLAGRFMKEIQIAEARAFYGFQIAIENIHSEMYSLLLESYIKDSNEKNRLFRAIETIPCVEKKANWALKWIDGSESFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKLLNNKLSEERVKGIVCDAVEIEREFVCDALPCALVGMNGGLMSQYIEFVADRLLGELGYPKMYDAQNPFDWMELISLQGKTNFFEKRVGEYQRASVMSNLNGYGSDSHVFKMDEDF	332

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca4g03380	332	Pfam	Ribonucleotide reductase, small chain	18	284	IPR000358	GO:0009263(InterPro)
	Soca4g03380	332	PANTHER	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN	5	332	IPR000358	GO:0009263(InterPro)
	Soca4g03380	332	ProSitePatterns	Ribonucleotide reductase small subunit signature.	107	123	IPR030475	-
	Soca4g03380	332	SUPERFAMILY	Ferritin-like	5	308	IPR009078	-
	Soca4g03380	332	Gene3D	Ribonucleotide Reductase, subunit A	2	309	IPR012348	GO:0016491(InterPro)
	Soca4g03380	332	CDD	RNRR2	19	293	IPR033909	GO:0009263(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca4g03380	K10808	ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
	Soca4g03380	K00526	ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	156599	Soca4g03380	Soca7g00358

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr9:5682370	Soca4g03380	Soca-Chr4:64214725	transposed
	Soca	Soca-Chr4:64214725	Soca7g00358	Soca-Chr7:5895080	wgd