Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca4g03406	ATGGAAGATGAATATGCAAAACTTATTAGGAGGATGAATCCACCCAGGGTTACAGTTGATAATACTTCTTCCCCAGATGCAACAGTAATTCAGGTTGAAAGTGTTAACAAGCATGGTATTCTGCTTGAAGTGGTCCAAGTTCTTGCGGATTTAGACCTCGTTATTACCAAAGCGTATATCTCATCGGATGGAGGGTGGTTCATGGATGTGTTCAGTGTCCGTAACCGTGATGGAGGCAAAGTTATAGATGAAAGGGTCGTCAGTTATATAAAACGGGTGCTTGAAAGCGACGCATTTTATCTCCCATCACTGGGTGGTTCAGTTGGATTGAAGCCATCTGAAGATTACACAGCAATTGAACTAGTTGGAACAGATAGACCTGGATTACTATCCGAAGTATCTGCAGTTCTAACGGACCTTGGTTGTAATGTGGTCAATGCGGAAATATGGACTCACAATGCTAGAGCTGCAGCTGTGGTACATGTTACAGATGAAAAAACAAGAGGCGCAGTTGAAGACCCAAAGAGACTCTTGACTATTAAAAAACTGCTTTGTAATATTCTCAAGGGAAACAATGACTTGAAGACTGCAAAAATGACACTATCAACCCCTGGTTTCACCCACAGACAGAGAAGATTGCATCAAATTATGTTTGCTGAGCGGGACTACGAAAAGGCGGAACAAGAAGAAAAAGAAAATAGATCAAGGCCACATGTTACTGTTTTAGATTGTGTTGAGAAGGATTACACGGTTATTACTATGCGGTGTAGGGATCGACCGAAGCTGCTGTTTGATATAGTTTGCACTCTAACTGACATGCAATATGTAGTTTTCCATGGAGTTGTCCACACAGGGAATATGGAGGCTTTTCAGGAATATTACATTCGACATGTTGATGGGAGTCCATTAAGCTCTGAGGCAGAGCGAGAGCGTGTTATGCAATGTCTTGAAGCTGCAATTGAGAGGAGGACATCTGAGGCACTAGAGCTTGAATTGTGCACTGCAGATCGTGTTGGACTTCTTTCTGATATAACCAGGATCTTTAGAGAAAATAGTTTAAGTATAAAAAGAGCAGAAATTTCCACTGAAGGTGGAAAAGCCAAGGACAAATTTTATGTTACAGACATGACCAGTAATAGCCCCGTGGACCCGAAGACCATAGAGTCTATTCAAAGACAAATTGGGAAACACACTGCGCTGCATGTCAGATGGAACTCTAGTCAATCACCAAAGCCTCCCCCTGAAGAAACAACAATGAGCTTTCTTTTTGGAAATTTGTTCAAAGGTCGATCATTTCAAACTTTTAAATTGGTTGGATCATACTCCTGA	1329	41.46	MEDEYAKLIRRMNPPRVTVDNTSSPDATVIQVESVNKHGILLEVVQVLADLDLVITKAYISSDGGWFMDVFSVRNRDGGKVIDERVVSYIKRVLESDAFYLPSLGGSVGLKPSEDYTAIELVGTDRPGLLSEVSAVLTDLGCNVVNAEIWTHNARAAAVVHVTDEKTRGAVEDPKRLLTIKKLLCNILKGNNDLKTAKMTLSTPGFTHRQRRLHQIMFAERDYEKAEQEEKENRSRPHVTVLDCVEKDYTVITMRCRDRPKLLFDIVCTLTDMQYVVFHGVVHTGNMEAFQEYYIRHVDGSPLSSEAERERVMQCLEAAIERRTSEALELELCTADRVGLLSDITRIFRENSLSIKRAEISTEGGKAKDKFYVTDMTSNSPVDPKTIESIQRQIGKHTALHVRWNSSQSPKPPPEETTMSFLFGNLFKGRSFQTFKLVGSYS	442

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca4g03406	442	SUPERFAMILY	ACT-like	113	173	IPR045865	-
	Soca4g03406	442	SUPERFAMILY	ACT-like	324	397	IPR045865	-
	Soca4g03406	442	CDD	ACT-ACR-3	249	323	-	-
	Soca4g03406	442	ProSiteProfiles	ACT domain profile.	118	199	IPR002912	-
	Soca4g03406	442	ProSiteProfiles	ACT domain profile.	329	407	IPR002912	-
	Soca4g03406	442	Pfam	ACT domain	331	392	IPR002912	-
	Soca4g03406	442	Pfam	ACT domain	28	85	IPR002912	-
	Soca4g03406	442	Pfam	ACT domain	118	172	IPR002912	-
	Soca4g03406	442	SUPERFAMILY	ACT-like	24	95	IPR045865	-
	Soca4g03406	442	PANTHER	ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED	7	405	IPR040217	-
	Soca4g03406	442	Coils	Coil	209	236	-	-
	Soca4g03406	442	Gene3D	-	114	184	-	-
	Soca4g03406	442	ProSiteProfiles	ACT domain profile.	29	106	IPR002912	-
	Soca4g03406	442	Gene3D	-	327	401	-	-
	Soca4g03406	442	CDD	ACT-ACR-2	117	190	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca4g03406	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	156605	Soca4g03406	Soca7g00367

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr4:64547641	Soca9g02345	Soca-Chr9:26713696	dispersed
	Soca	Soca-Chr4:64547641	Soca4g04429	Soca-Chr4:75529933	wgd
	Soca	Soca-Chr4:64547641	Soca7g00367	Soca-Chr7:6014103	wgd