Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca4g03418	ATGAAGTCATCATTAGGAAAGCTAGGGCGAAAATTATCGATGCAGAAAAGTGATGTGAAAGATCATCATCAACAACAGTATCATCATCAGCCTTCTCCTTATATTGATGAGCTTGCTTTAGCTTCTAAGGATATGCAAGATATGAGAAACTGTTATGATGGGTTATTATCTGCGGCCGCAGCAACGGCAAATAGTATATATGAATTTTCGGAGTCGCTAAATGAAATGGGCAACTGTTTGTTGGAAAAAAACCTTGCAGATTCTGATCCTGAATGTGGAAAAGTGCTATCTACTTTAGGAAATATGCAATTGGAACTTCAGAAAATTGCAGATGGTTATCGTTCTTATGTGATTGTGACGATTACCAATCCATCAGAGTCTCTCCTCTGTGAGCTACGGAAAGTGGAGGAGATGAAACTTCAATGTGATGAAAAAAGAGAGGTGTATGAGTACATGATGGCACAACACAGAGAGAAGGGAAAACTGAGAAATGGAAAAGTTGAAAGTTCAATTGCTCAAAAACTACAAGCAGCTCAAGAGGAATATGATGAAGTGACTAGATTATGTGTATTTCGGGTGAAGTCGCTTAAGGAGGGACAATGTCGCAGTCTTTTAACACAAGCTGCTCGTCACCACGTTGCACAGCTGAATTTCTTTCGCAAAGGACTTAAAGCTCTTGAAGCAGTTGAACCTTTCATAAGAAATGTTGCAGAAAAGAATCATATTGATTACCAACTCAGTGAACTACCTGATCGAGAGTCCCATGGAGGTGAACCTATGAGTGGCTATGAAAGTACCGATGATGGAGAATTGAGTTTTGATTACAAACAAAAGAAACAAGGACTCGATGATGATGGCAGCTCACCAAATCCAATGGAGTTGGACCAGGTAGATGTTCCATATCGTCAAGTTTCAAATTTAGAAGATTTAGAGATAAATCAGAATAAACCTAAAGGGGAACAGCTTATTGGTAGGCAACCTAGAGTGAGCAGCTATTCTGCCCCACTATTCCCTGAAAAGATTGGTACATCTGAAAGGCCAAAAGAAACGCAACCCCCACCAAAATTTTACTCTTATGTATTACCTCCCCCCATTGTGGATACCCGGAATCCAGTTTCAAGACCCTCTACATCCATTTCTCATTCCATTCCATCTCAAAATCTGCAACCACCATTGCCACCTGACCATGAGAAGCATTTAAGACATACCAGTGATGATAACACATCGACATCTGCTTTGACCTCAAAGGCCCAGTCAACAATAAAAGATGGTAGTGGTATCAATTCGTCCATCCAGTTACCTGCTCCCACTGGAAGATTATCATTCTCACAACGGGATAGTTATAGCAGAACTGATAGTAAAGCAGCCAAACGACAATCTTTTTCTGGTCCATTACCACCAAGCAAGCAATTCTCTTTTAAAATGGTATCTAATAATAGCGGGCCCATTACCCCTACTGAACTTCCTCAGCCGCCTTCTCGGGGTCCAGTTTCTCAGCCAAATTTGTCATCAAACGTGCCCCGCAGTGCTTCTCCACCTCTTATATCTTCACCTAAAATAAGTGAGCTTCATGAGCTTCCCAGGCCGCCTGGTAGTTTAGCCTTCTCGAAACCTGTTACTATTTCTAGTGGTTTGATTGGACATTCAGCACCTTTATTATCAAAAAATCAAGAGATCTCCCCACCGAATAAAAGGGCTATGTTAACATCAACTTGTGCATCCCCTCTTCCACTCCCGCCTTCAGTTGCTACAAAAAGCTTTTCCATACCTTCTGGTAACAATGAGACCTGA	1791	41.32	MKSSLGKLGRKLSMQKSDVKDHHQQQYHHQPSPYIDELALASKDMQDMRNCYDGLLSAAAATANSIYEFSESLNEMGNCLLEKNLADSDPECGKVLSTLGNMQLELQKIADGYRSYVIVTITNPSESLLCELRKVEEMKLQCDEKREVYEYMMAQHREKGKLRNGKVESSIAQKLQAAQEEYDEVTRLCVFRVKSLKEGQCRSLLTQAARHHVAQLNFFRKGLKALEAVEPFIRNVAEKNHIDYQLSELPDRESHGGEPMSGYESTDDGELSFDYKQKKQGLDDDGSSPNPMELDQVDVPYRQVSNLEDLEINQNKPKGEQLIGRQPRVSSYSAPLFPEKIGTSERPKETQPPPKFYSYVLPPPIVDTRNPVSRPSTSISHSIPSQNLQPPLPPDHEKHLRHTSDDNTSTSALTSKAQSTIKDGSGINSSIQLPAPTGRLSFSQRDSYSRTDSKAAKRQSFSGPLPPSKQFSFKMVSNNSGPITPTELPQPPSRGPVSQPNLSSNVPRSASPPLISSPKISELHELPRPPGSLAFSKPVTISSGLIGHSAPLLSKNQEISPPNKRAMLTSTCASPLPLPPSVATKSFSIPSGNNET	596

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca4g03418	596	MobiDBLite	consensus disorder prediction	567	596	-	-
	Soca4g03418	596	MobiDBLite	consensus disorder prediction	13	27	-	-
	Soca4g03418	596	MobiDBLite	consensus disorder prediction	1	32	-	-
	Soca4g03418	596	Gene3D	Arfaptin homology (AH) domain-BAR domain	32	251	IPR027267	-
	Soca4g03418	596	MobiDBLite	consensus disorder prediction	497	516	-	-
	Soca4g03418	596	SUPERFAMILY	BAR-IMD domain-like	37	234	IPR027267	-
	Soca4g03418	596	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	1	594	IPR037488	-
	Soca4g03418	596	MobiDBLite	consensus disorder prediction	406	484	-	-
	Soca4g03418	596	MobiDBLite	consensus disorder prediction	370	386	-	-
	Soca4g03418	596	MobiDBLite	consensus disorder prediction	308	531	-	-
	Soca4g03418	596	CDD	BAR	44	231	-	-
	Soca4g03418	596	MobiDBLite	consensus disorder prediction	248	270	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca4g03418	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	156049	Soca3g01519	Soca4g03418
	156610	Soca4g03418	Soca7g00377

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr3:15095698	Soca4g03418	Soca-Chr4:64646280	dispersed
	Soca	Soca-Chr4:64646280	Soca7g00376	Soca-Chr7:6193365	dispersed
	Soca	Soca-Chr4:64646280	Soca4g03418	Soca-Chr4:64646280	tandem