AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca4g03444 ATGGAAGACAGCTTCAAAGTTCGTGTAGACAAAACTTTCGGATCACTGGAACCATCTTCTTCATCAACCAACCCAACCCAGCAACAAAAACCATCTTCACTAAACTCACTCTGGTCCCTCACAGACGAAGAAATCGAAACAAACAAATGGTTACATCACAAAAAACCCACCTCCGATATCAAAGACATTGATGAACAAATTCACCGTCTTAAAAACCCGAAACCCGTTTCCCCTTTTCTTCAAGGCCTTCTTGCTCAACCATCTTCAACTTCTGATCATAACCTTGAAGAATCAGATATTCAAGAACTTGATGATGATGACGATGATGATAATGAGGATGATGAATATGAGAAGAAACCCGAGATATCGAAACCCGATGATCATAATGAGGAAGAATGGAACATTCGATCTTCAGTTGGCCTGGACCCAACTCTTGACAATGAGGAAGAGGAAGATGCTTATGACAAGGTAGCTGTAGGCAAGGATTTAGATCCTGAGGATCGTTTTTACATGAAAGATGTCAATGATTATGATGTCGAAATAGATTCTAATGCCATGCTTCCCAGCTCATTCACTGAGGTAATAAGAGATCCACGTGCAAATCACAAGGCAGCGAAACTCAGGCTTAAAGAAGATGATGAATCTGCTAGAAAATTATGCTTGCAGGCTTCTGAGAAAAAGATTCAGGAACCAATTACGAAGGAAAATCAAATTGCTACAGAATCAAAAGAACATTTAGTGATGAACAAACCTTCAGGATCAAAAGTGGTACCTTTTTTCCCTCAAAGTTCTTCTAGTCTTCCAGACCATGTGCGAAATCCTTCAAAGTATACGCATTATACTTTCGATTCACTGGATGGTGTTGATGAAGAAGCTAATCGAAAAGCTTTTATGGATTTCTCTAATTTGGCCAAGGGGTCTGCTGCCATGGAGATGGATGATGATGTTTCCTCTGATTTAATAAAATCTATTATCTTCACCCCAAAAAAGAAGTCAGGTGATGTTTCAATGAAGGATAGTAAGGTTAATGGATATGAAAACAAGAAAGCGGTTCCCATTAGTATTGTTGATAGTGAGGTTTGCATGATGGATGAAGACGAGCCTGAAATAGCAACCAATAAAAGTAGCGGCATGCAGAAAGGTGGTCGCAGATATCGAACAAAGGGCAGCGTCAATGATGAATGA 1185 39.66 MEDSFKVRVDKTFGSLEPSSSSTNPTQQQKPSSLNSLWSLTDEEIETNKWLHHKKPTSDIKDIDEQIHRLKNPKPVSPFLQGLLAQPSSTSDHNLEESDIQELDDDDDDDNEDDEYEKKPEISKPDDHNEEEWNIRSSVGLDPTLDNEEEEDAYDKVAVGKDLDPEDRFYMKDVNDYDVEIDSNAMLPSSFTEVIRDPRANHKAAKLRLKEDDESARKLCLQASEKKIQEPITKENQIATESKEHLVMNKPSGSKVVPFFPQSSSSLPDHVRNPSKYTHYTFDSLDGVDEEANRKAFMDFSNLAKGSAAMEMDDDVSSDLIKSIIFTPKKKSGDVSMKDSKVNGYENKKAVPISIVDSEVCMMDEDEPEIATNKSSGMQKGGRRYRTKGSVNDE 394
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca4g03444 394 MobiDBLite consensus disorder prediction 45 71 - -
Soca4g03444 394 MobiDBLite consensus disorder prediction 369 394 - -
Soca4g03444 394 MobiDBLite consensus disorder prediction 14 43 - -
Soca4g03444 394 MobiDBLite consensus disorder prediction 98 116 - -
Soca4g03444 394 MobiDBLite consensus disorder prediction 117 135 - -
Soca4g03444 394 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 393 IPR029338 -
Soca4g03444 394 MobiDBLite consensus disorder prediction 1 167 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca4g03444 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Soca Soca-Chr4:65009391 Soca9g04743 Soca-Chr9:67018046 dispersed