Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02222	ATGGATTCTGTTCAAGATGATTTGTCCGTCCTCCAATGGCCCGATTCGCTTGGCCGGTTTGGGAAATATGGTGGGAAGTATGTCCCTGAAACCCTGATGTATGCTCTTACTGAACTTGAATTAGCTTTTAAAGCCCTTCTTACTGACCATCAGTTCCAGTGTGGCGGTCACCGTGTTGGAGGGAGTTCCATGCCATTGGTAAAGAAACAAGAAAGCGGGCGTTGGAAAAATGGGGTGGAAAACCAGATGTATTGGTTGCTTGTGCTATTTGTTGATGACAAAGAGGTTAGATTGATTGGAGTAGAGGCTGCGGGTTTTAGTCTAGATAGTGGAAAACATGCAGCAACGTTAACAAAAGGAGAAGTCGGGGTGTTGCATGGAGCCATGAGTTATTTGTTGCTGGATGATGATGGACAAATCATTGAGACTCACTCTATTAGTGCAGGGCAGAACTACCCAGGAGTTGGACCAGAGCACAGCTTTCTGAAAGATTTGGGTCGGGCTGAGTATAATAGCATCACAGGATTCATGGGAGTAATTGTTTTTTTCCTTTATTCTTGTGTTTTTGTAAATGAAGCTTTTAAGAGACTATCAAGATTAGAGGCATTATCCCAGCTCTGTAGACATCTCATGCACTCGCTTATCTAG	648	43.67	MDSVQDDLSVLQWPDSLGRFGKYGGKYVPETLMYALTELELAFKALLTDHQFQCGGHRVGGSSMPLVKKQESGRWKNGVENQMYWLLVLFVDDKEVRLIGVEAAGFSLDSGKHAATLTKGEVGVLHGAMSYLLLDDDGQIIETHSISAGQNYPGVGPEHSFLKDLGRAEYNSITGFMGVIVFFLYSCVFVNEAFKRLSRLEALSQLCRHLMHSLI	215

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02222	215	Gene3D	-	1	58	IPR036052	-
	Soca5g02222	215	SUPERFAMILY	Tryptophan synthase beta subunit-like PLP-dependent enzymes	88	174	IPR036052	-
	Soca5g02222	215	Gene3D	-	89	174	IPR036052	-
	Soca5g02222	215	PANTHER	TRYPTOPHAN SYNTHASE-RELATED	12	53	IPR023026	GO:0000162(PANTHER)\|GO:0000162(InterPro)\|GO:0004834(PANTHER)\|GO:0004834(InterPro)\|GO:0005737(PANTHER)\|GO:0009570(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02222	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	155602	Soca2g04452	Soca5g02222

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	5107635	Soca	Soca1g06636	Soca-Chr1:94979233	Soca5g02222	Soca-Chr5:23726246
	5125971	Soca	Soca5g01777	Soca-Chr5:19028955	Soca5g02222	Soca-Chr5:23726246
	5125972	Soca	Soca5g01778	Soca-Chr5:19028955	Soca5g02222	Soca-Chr5:23726246
	5175889	Soca	Soca2g04452	Soca-Chr2:88633532	Soca5g02222	Soca-Chr5:23726246