Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02231	ATGGTTTCATCTGCCAAACTCAAATCTGTTGATTTTTACAGGAAAATTCCAAGAGATTTGACTGAGGCGTCACTGTCAGGTGCCGGCTTGTCTATCATAGCAGCTCTTTCCATGATGTTTTTATTTGGAATGGAACTACATAATTATTTGAGCATCAGTACCTCAACCTCTGTCATAGTTGACAGAAGTCCTGACGATGATTTCTTAAGGATTGATTTTAATCTTAGTTTTCCCGCTTTATCATGTGAGTTTGCATCCGTGGACCTGAGTGATGTACTGGGAACTAACAGGTTAAACATAACAAAAACAGTCCGCAAATATTCAATTGACAAACATCTACGAACTACTGGCTCTGAGTTTGACTCTGGACCAGTTGCTGATATAGTCAAACACGACGATGAAACTGACGAGGAATATGGTGAAGGATCTGTTACTCTAAATGCACACAATTTTGATAGGATTTCTCATCAGCATTCAATCTTGGTTGTAAATTTCTATGCTCCTTGGTGCTATTGGAGTAACCGCCTGAAACCCTCATGGGAGAAGGCAGCCAAAATTATAAGAGAAAGGCATGATCCAGAAATTGATGGCCGTATCATTATGGGGAAGGTTGACTGTACTGAGGAAGTTGACCTGTGTAGAAATCACCACATACAAGGTTATCCATCTATACGCATATTCCGTAAGGGCAGCGATGTCAAGGATGAGCATGGGCACCACGAGCATGAATCATATTATGGTGACCGAGATACGGATACTTTGGTGAATACAATGGAAAGCTTGGTTGCACCTATTGCATTGGAGTCGGTGAATCTGTCCTTGGAGGATAAATCTGGCACAACTACTGAGAATGCCAAAAGACCTGCTCCACGTGAAGCAGGGTGTAGAATTGAAGGGTTTGTACGAGTCAAGAAGGTTCCTGGTAATCTAGTAATCTCAGCCCGTTCAGGGTCCCACTCTTTTGATGCTTCAGTGATGAACATGTCACATGCAATTTCTGCCTTTTCTTTCGGTAAGAAGCTCACTCCAAGAGTGATGAGTGATATTAAGAGAATACTACCTTACATTGGTGCAAGCCATGATAAGTTGAATGGCAAGCAATATCTCACCAACCCAGAAGATCATGCAAATGTTACGGTTCAGGATGAAACCGGTCATTGTCAAGTATGGATTGAGATGAGTGGGGTTGGGTTGATAAGTAAATGTATTGAAATTGCCACTTGTAATTTTTACATCTTGACATACACTTCGTAG	1254	41.39	MVSSAKLKSVDFYRKIPRDLTEASLSGAGLSIIAALSMMFLFGMELHNYLSISTSTSVIVDRSPDDDFLRIDFNLSFPALSCEFASVDLSDVLGTNRLNITKTVRKYSIDKHLRTTGSEFDSGPVADIVKHDDETDEEYGEGSVTLNAHNFDRISHQHSILVVNFYAPWCYWSNRLKPSWEKAAKIIRERHDPEIDGRIIMGKVDCTEEVDLCRNHHIQGYPSIRIFRKGSDVKDEHGHHEHESYYGDRDTDTLVNTMESLVAPIALESVNLSLEDKSGTTTENAKRPAPREAGCRIEGFVRVKKVPGNLVISARSGSHSFDASVMNMSHAISAFSFGKKLTPRVMSDIKRILPYIGASHDKLNGKQYLTNPEDHANVTVQDETGHCQVWIEMSGVGLISKCIEIATCNFYILTYTS	417

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02231	417	Gene3D	Glutaredoxin	130	289	-	-
	Soca5g02231	417	Pfam	Endoplasmic reticulum vesicle transporter	289	379	IPR012936	-
	Soca5g02231	417	Pfam	Thioredoxin	144	243	IPR013766	-
	Soca5g02231	417	SUPERFAMILY	Thioredoxin-like	139	261	IPR036249	-
	Soca5g02231	417	Pfam	Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)	7	97	IPR039542	-
	Soca5g02231	417	CDD	PDI-a-family	144	258	-	-
	Soca5g02231	417	FunFam	Protein disulfide-isomerase 5-4	131	287	-	-
	Soca5g02231	417	PANTHER	ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN	1	371	IPR045888	GO:0005783(PANTHER)\|GO:0030134(PANTHER)
	Soca5g02231	417	ProSiteProfiles	Thioredoxin domain profile.	117	263	IPR013766	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02231	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	155601	Soca2g04438	Soca5g02231

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	5126303	Soca	Soca5g02231	Soca-Chr5:23808765	Soca5g03279	Soca-Chr5:36765579
	5163571	Soca	Soca2g04241	Soca-Chr2:82253506	Soca5g02231	Soca-Chr5:23808765
	5163580	Soca	Soca2g04314	Soca-Chr2:83191731	Soca5g02231	Soca-Chr5:23808765
	5164093	Soca	Soca3g01572	Soca-Chr3:15575884	Soca5g02231	Soca-Chr5:23808765
	5175888	Soca	Soca2g04438	Soca-Chr2:88393858	Soca5g02231	Soca-Chr5:23808765