Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02234	ATGATGAAACTATTCAAGAAAGACCCAGGATTATCAGCTGATCATTTTTATGAAATTAGAGCTGGATGCAACACAGATGATGTTTCTGATACTAAATTTAAAATCAAGGCTGGGAAGACTCTAAGTGAGAAAAGGTGGCGGGCTGCATTCAGACCGGGAGGTTCTCTTGATATAGGCAAGTGCCTTAACCGAATATATCGTGGAGGGATTCATCCATCAATTAGAGGAGAAGTGTGGGAGTTTTTGCTGGGTTGTTATGATCCTAAAAGCACATTTGATGAACGAGAAGAGATACGACATAGACGAAGGGAGCAATATGCTGAGCTGAAAGAATCATGCAGTAACATGTTTCCTGTGGTTGGAAGTGGAAAGTTCGTCACTGCACGTGTTATTGCAGCAAATGGTGATCCAATTCAAGATCCTGTCGTACTTGTAGGGACGAATCTTGAAAATATTCCTCCACAATCACAAGAAAGTGGTGGTCTGAGTCAAGCCAAAGTGGTTACTCGGGAGCATGACAAGGAAATAATACAGTGGAAGCTTGCTCTACATCAAATAGGTCTTGATGTGGTTCGCACGGACAGGACACTAATGTTTTACGAGAAGCAAGATAATCTGGCAAAACTTTGGGATGTTCTTGCTGTCTATGCTTGGCATGATAAAGATGTTGGTTATGGGCAAGGGATGAGTGATATTTGCTCCCCGATGATTATGCTTTTTGAACATGAAGCAGATGCATTTTGGTGCTTTGAACGTGTAATGCGCAGACTGGTGCACGGGCAACTCTGTGGGTGTTGA	798	42.61	MMKLFKKDPGLSADHFYEIRAGCNTDDVSDTKFKIKAGKTLSEKRWRAAFRPGGSLDIGKCLNRIYRGGIHPSIRGEVWEFLLGCYDPKSTFDEREEIRHRRREQYAELKESCSNMFPVVGSGKFVTARVIAANGDPIQDPVVLVGTNLENIPPQSQESGGLSQAKVVTREHDKEIIQWKLALHQIGLDVVRTDRTLMFYEKQDNLAKLWDVLAVYAWHDKDVGYGQGMSDICSPMIMLFEHEADAFWCFERVMRRLVHGQLCGC	265

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02234	265	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	54	259	IPR035969	-
	Soca5g02234	265	Pfam	Rab-GTPase-TBC domain	160	255	IPR000195	-
	Soca5g02234	265	ProSiteProfiles	TBC-rab GAP domain profile.	69	265	IPR000195	-
	Soca5g02234	265	Gene3D	putative rabgap domain of human tbc1 domain family member 14 like domains	157	261	-	-
	Soca5g02234	265	PANTHER	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	60	254	-	GO:0005096(PANTHER)\|GO:0090630(PANTHER)
	Soca5g02234	265	FunFam	TBC1 domain family member 15-like	163	261	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02234	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	155598	Soca2g04436	Soca5g02234

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	5126305	Soca	Soca5g02234	Soca-Chr5:23821449	Soca8g04140	Soca-Chr8:67245512
	5154339	Soca	Soca5g02233	Soca-Chr5:23821449	Soca5g02234	Soca-Chr5:23821449
	5154340	Soca	Soca5g02234	Soca-Chr5:23821449	Soca5g02235	Soca-Chr5:23821449