Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02240	ATGGCAGCCATGGCAACAGCCTTTGTCTCCAAGACATCTTTCATCGACCAATCATCGTTCCATGGCGTCCCAGTTTCATCTCCTAAGCGGATCACGTCTGTCAAATCAAACAACAACAAGAAGATCAACACACCCATCACCAGCATGTCCTCCGCCACACCTTATGATCTTGGATCATTCACGTTTGCACCCATCAAAGAAGCGATCGTGTCGCGTGAAATGACTAGAAGATACATGACCGATATGATCACGTACGCTGATACCGATGTTGTTATTGTTGGTGCTGGCTCTGCTGGTCTTTCTTGTGCTTATGAGCTTAGCAAAAACCCCAACGTTCAGGTAGCCATCATTGAGCAATCTGTGAGCCCTGGTGGTGGAGCATGGCTCGGTGGACAATTGTTCTCAGCCATGGTTGTCCGCAAGCCAGCTCACCACTTCCTAGACGAGCTCGAGATCGAGTACGACGAGCAAGAGGACTACGTGGTCATCAAGCACGCTGCTCTGTTCACCTCCACCATCATGAGCAAGCTTTTGGCCAAGCCAAATGTGAAGCTCTTTAATGCCGTTGCTGCTGAAGACTTGATTATCAAGGGAGGAAGAGTAGGTGGTGTTGTGACCAACTGGGCTTTGGTCGCAATGAACCACGACACACAATCGTGCATGGACCCAAATGTGATGGAGTCTAAGGTGGTTGTGAGCTCTTGTGGCCATGATGGTCCCATGGGTGCCACTGGAGTCAAGCGACTAAGGAGCGTTGGGATGATTGAGAGTGTTCCCGGGATGAAAGCTCTTGACATGAACACTGCTGAAGATGAAATTGTGAAGATGACTAGAGAGGTTGTTCCTGGTATGATTGTTACTGGAATGGAAGTTGCTGAGATTGATGGATCTCCAAGAATGGGGCCAACATTTGGGGCTATGATGATCTCAGGACAGAAGGCAGCTCATCTGGCTTTGAAGTCGTTGGGACTCCCGAATGCATTGGATGGGACACTTGTGGGAAGCATGCACCCAGAGCTGATCCTTGCGGCTGCCGACTCTACTGAGACCGTTGATGCCTAA	1062	49.72	MAAMATAFVSKTSFIDQSSFHGVPVSSPKRITSVKSNNNKKINTPITSMSSATPYDLGSFTFAPIKEAIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLAKPNVKLFNAVAAEDLIIKGGRVGGVVTNWALVAMNHDTQSCMDPNVMESKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNTAEDEIVKMTREVVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKSLGLPNALDGTLVGSMHPELILAAADSTETVDA	353

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02240	353	Pfam	Thi4 family	71	304	-	-
	Soca5g02240	353	PANTHER	THIAMINE THIAZOLE SYNTHASE	10	352	-	-
	Soca5g02240	353	Gene3D	-	87	322	IPR036188	-
	Soca5g02240	353	FunFam	Thiamine thiazole synthase, chloroplastic	87	322	-	-
	Soca5g02240	353	Gene3D	-	56	86	-	-
	Soca5g02240	353	NCBIfam	sulfide-dependent adenosine diphosphate thiazole synthase	67	322	IPR002922	-
	Soca5g02240	353	SUPERFAMILY	FAD-NAD(P)-binding domain	55	316	IPR036188	-
	Soca5g02240	353	Hamap	Thiamine thiazole synthase, chloroplastic [THI4].	2	331	IPR027495	GO:0009228(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02240	K03146	cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	156562	Soca4g03184	Soca5g02240

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	5126309	Soca	Soca5g02240	Soca-Chr5:23864843	Soca8g02143	Soca-Chr8:29969084
	5178040	Soca	Soca4g03184	Soca-Chr4:61896400	Soca5g02240	Soca-Chr5:23864843