AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g02263 ATGATGCGGATTAAAAATAAAAACAAAAGTTTGGTAGTATTGCCTCAGAAAGTCTCTCCTGACTACATTCCGCACCAGCCAAATTTGTATGAAGGTGAAAGTCTTCTTCATCTTCTCAACTCAATTCAAAGAGAAATCAAGCTAGCCAGACTTTCAGATGAATCTTTAACTCATAAAATTTGGCTGAAGCAACAATTTTCAATCGGTGTCAATGATGTGACCCGTGTGCTTGAACGGATGCCGTCTCTTATTGGATCTATAAGCTCTACTTCACAAAATGCTACTTACTGCAGTCGTAATTCCAAATCCCCTCCCATCCAAATGCAGGCCATACTTATAGCTACAGACTGCAATCCTCGAGGGCTTACAAAGCACCTGCCGAGCCTGGCCTCATCTAGGGAAGTGCCAGTCATCTTTGTTAAAGATAAGAAAGGGGGATCTTTCAAGTTAGGTGAAATGGTGAATTTGAAGACGGCTATGGCAATCGGTGTCAAGGCCAGAGGAAATTCAATCAACAAACTTATTGGGGAGATTCTTGGAGATAACCAGGTAAATAAAGACGTTGTGGGGTCGTGA 576 41.84 MMRIKNKNKSLVVLPQKVSPDYIPHQPNLYEGESLLHLLNSIQREIKLARLSDESLTHKIWLKQQFSIGVNDVTRVLERMPSLIGSISSTSQNATYCSRNSKSPPIQMQAILIATDCNPRGLTKHLPSLASSREVPVIFVKDKKGGSFKLGEMVNLKTAMAIGVKARGNSINKLIGEILGDNQVNKDVVGS 191
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g02263 191 PANTHER OS07G0636400 PROTEIN 2 184 - -
Soca5g02263 191 SUPERFAMILY L30e-like 57 178 IPR029064 -
Soca5g02263 191 Gene3D - 52 180 IPR029064 -
Soca5g02263 191 Pfam Ribosomal protein L7Ae-L30e-S12e-Gadd45 family 108 170 IPR004038 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g02263 - -