AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g02267 ATGGGTGGTGGGGTAGCTATGAGAGCGGCTGCAAAGGCTGCCGGAATAGGTGTATTCACCACCGGTATCCGCGGCGGAGAAATCCCAGTTGTTTCCGTCGCACGGCGGACCACCCTTGCGTCTGTCGCTAACTCAGGGGACGATTTGAAATTGGTCATTAATGGTAAGAATGATGTTGAAAGTGTTGAAAAGCCTGTGATTGATGATTGGGAATTTGCTGGTGAAGAAGAAGATGAACTGTTTATGGAACGTGGTGAACCTAAAATGCCTAGGCTTGTGTTTGGTGGTGCACCCACTATTCAAGAAGCTAAACAGGCTACCGCTGATCTTAACTTTGCACTTGAACAGACTTATCTGTCTACAAATGCCCCTGATGGACATCAGTTATCGGATTCGGAGAATGTGGTGGCCAAACTTAACTTTGCTAGTGAAAAAGTGGTAATCCCCTCAGCATCAAAAAATGCAATTAAAGCGTTTAGGCTTCTTAACGAAAATCCTAGAGCTCAGACTGTTGTTGCTTCAATTGCTTCCGATCCAAATGTCTGGAATGCAGTTATGCAAAATGCTGATCTTGTGGATTTTTTGCAAACCCAAAAGACAGAAACGGACCCAAAGGTGAATTATTCGTCTGATGAGAGCTCAGAAGCAGGTGATTCCAAATCAGGATCAGGAAAAGGTTTCATGGAGTATGTGGTGGACATCAAGCAGAAGATCACTGTTACAGTGGTGGACATGATGAACAGCTTATCAGATACCTTCCAGACTTTTTTTGGTGGTTTAGGTAAAGATGATTTTACTGTGAATCCAGATGGAACTGCTGCAATATCTACAGAGAAAGCTGTGATTGGAGCAAGCCTTATGGGACTGGCAATTATGGTGATCTCTGTGGTGGTTCTTAAGCGCCCAGCTCCTTAG 915 44.48 MGGGVAMRAAAKAAGIGVFTTGIRGGEIPVVSVARRTTLASVANSGDDLKLVINGKNDVESVEKPVIDDWEFAGEEEDELFMERGEPKMPRLVFGGAPTIQEAKQATADLNFALEQTYLSTNAPDGHQLSDSENVVAKLNFASEKVVIPSASKNAIKAFRLLNENPRAQTVVASIASDPNVWNAVMQNADLVDFLQTQKTETDPKVNYSSDESSEAGDSKSGSGKGFMEYVVDIKQKITVTVVDMMNSLSDTFQTFFGGLGKDDFTVNPDGTAAISTEKAVIGASLMGLAIMVISVVVLKRPAP 304
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g02267 304 MobiDBLite consensus disorder prediction 202 220 - -
Soca5g02267 304 MobiDBLite consensus disorder prediction 202 223 - -
Soca5g02267 304 PANTHER OS08G0179900 PROTEIN 1 301 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g02267 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5154346 Soca Soca5g02266 Soca-Chr5:24179852 Soca5g02267 Soca-Chr5:24179852
5154347 Soca Soca5g02267 Soca-Chr5:24179852 Soca5g02268 Soca-Chr5:24179852