Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02336	ATGGAAAGTGTTAATACTAATAATAATTATTATAAGTATTGTAAAGAGTTAGAAGTGGGTGTGAAAGTTGTGCAAATGGCTTGTTGTTTATGTCAGAAGCTGCAAAAAGGTTCATTTGGTCCAAACCCTGATCATGTTGTTTCTAAACATGATGATTCACCTGTTACTGTTGCTGATTGGAGTGTACAAGCAATGATTAGTTGGATACTATCGGACACATTTGGTAGAGAAAATGTGTCGATTGTTGCTGAAGAAGATGCACAAACACTCTCTGATAGTAATGCCACAAGTTTATTGGCATCCGTGGTTGCAACCGTGAATGAAAGTTTAGCCATGGCACCACGTTTCGGTCTGAAGGGACCAGCCGCACCCCTTGGGGGTTCCGAAGTTCTTGATGCTATTAGCCGGTGCAACTCAACTGGTGGTCCGGTGGGAAGGCATTGGGTCCTTGACCCTGTTGATGGAACTTTAGGTTTCGTGCGTGGAGGCCAGTATGCTGTGGCTTTGGCTTTGATTGAAAATGGGCAGGTTGTGGTTGGAGTTCTTGGGTGTCCTAATTATTCGAGTAAAAAGAAATTGGTTAATAACTCAAGTGCACCAAAATCGGATTTGTGGCAAGAAGGATGTGTTATGTACACAAGTAAAGGTAGCGGTCAATCTTGGATGCAGCCATTAGTTCATGGTGATGGGACCCTTGAGTGGCCCAATTCAGCTAGTGTTATACGGGTTTCTTCTATTGATAACCCTGTAATGGCTACATTTTGTGAACCTGTGGAGAAAGCCAACTCTAACCATTCGTATAGTGCTGGAATTGCATACAGTTTAGGACTTAGAAAGCAACCGTTGCGTGTTTACAGCATGGTGAAATATGCTGCAATTGCACGTGGGGATGCAGAGATATATATGAAGTTTGCAAAGGCCGGATACATGGAAAAGATATGGGATCATGCTGCAGGGGTGGTGATTGTGGAAGAAGCTGGTGGTGTAGTGACTGATGCTGGCGGAAGGCCATTGGATTTTTCAAAAGGGGTGTATCTCGAAGGTCTTGATCGGGGTATTGTGGCTTGTTCCGGGGTGAAGTTGCATGAGAAAATCATAGGTGCTGTTTATGCTAGTTGGGACTCTTCTCATTTGTGA	1137	43.71	MESVNTNNNYYKYCKELEVGVKVVQMACCLCQKLQKGSFGPNPDHVVSKHDDSPVTVADWSVQAMISWILSDTFGRENVSIVAEEDAQTLSDSNATSLLASVVATVNESLAMAPRFGLKGPAAPLGGSEVLDAISRCNSTGGPVGRHWVLDPVDGTLGFVRGGQYAVALALIENGQVVVGVLGCPNYSSKKKLVNNSSAPKSDLWQEGCVMYTSKGSGQSWMQPLVHGDGTLEWPNSASVIRVSSIDNPVMATFCEPVEKANSNHSYSAGIAYSLGLRKQPLRVYSMVKYAAIARGDAEIYMKFAKAGYMEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGVYLEGLDRGIVACSGVKLHEKIIGAVYASWDSSHL	378

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02336	378	ProSitePatterns	Inositol monophosphatase family signature 2.	314	328	IPR020550	GO:0046854(InterPro)
	Soca5g02336	378	Gene3D	-	11	231	-	-
	Soca5g02336	378	FunFam	PAP-specific phosphatase HAL2-like	242	375	-	-
	Soca5g02336	378	Pfam	Inositol monophosphatase family	52	370	IPR000760	-
	Soca5g02336	378	CDD	PAP-phosphatase	16	371	-	-
	Soca5g02336	378	NCBIfam	3'(2'),5'-bisphosphate nucleotidase	14	376	IPR006239	GO:0006790(InterPro)\|GO:0008441(InterPro)
	Soca5g02336	378	SUPERFAMILY	Carbohydrate phosphatase	15	371	-	-
	Soca5g02336	378	ProSitePatterns	Inositol monophosphatase family signature 1.	148	161	IPR020583	-
	Soca5g02336	378	PANTHER	PHOSPHATASE	10	374	IPR051090	GO:0000103(PANTHER)\|GO:0008441(PANTHER)\|GO:0042578(PANTHER)
	Soca5g02336	378	Gene3D	-	242	372	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02336	K01082	3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	157074	Soca5g02336	Soca9g03427

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:24929245	Soca9g03548	Soca-Chr9:44717741	dispersed
	Soca	Soca-Chr5:24929245	Soca5g02582	Soca-Chr5:28197967	wgd
	Soca	Soca-Chr5:24929245	Soca9g03427	Soca-Chr9:42554998	wgd