Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Soca5g02368 | ATGGCTAAAAACGTTTGTTGGTTTCTTGTTATAATCTTAGCAATCTATTTTCCGTGTTTTCAAACAACAGTGTCCATGTTACCCCAATGGTCTGTACTAAGCCGTTTGTCGGGGGCATCTCGTCAACTCGTGGATGACACAATTGACATGAGGGAAGAAATGATGATGGAGTCCGAAAGTGCTCGACGAGTCCTGGCTGGAAGGGGTTATATAAGCTATGGCGCGATGCATAAGAATAATGTTCCGTGCAACCAACGTGGTCAATCTTATTACGATTGTAATAGTAGAGGAGAGGCTAACCCGTATAATCGAGGGTGTAATGTTATTACTAGGTGTGGTGGTCGCTAA | 348 | 43.39 | MAKNVCWFLVIILAIYFPCFQTTVSMLPQWSVLSRLSGASRQLVDDTIDMREEMMMESESARRVLAGRGYISYGAMHKNNVPCNQRGQSYYDCNSRGEANPYNRGCNVITRCGGR | 115 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Soca5g02368 | 115 | PANTHER | RAPID ALKALINIZATION FACTOR-LIKE | 13 | 112 | - | GO:0009506(PANTHER)|GO:0019722(PANTHER) | |
| Soca5g02368 | 115 | Pfam | Rapid ALkalinization Factor (RALF) | 52 | 113 | IPR008801 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Soca5g02368 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Soca | Soca-Chr1:1646523 | Soca5g02368 | Soca-Chr5:25255592 | dispersed | |
| Soca | Soca-Chr5:8288996 | Soca5g02368 | Soca-Chr5:25255592 | dispersed | |
| Soca | Soca-Chr5:25255592 | Soca8g01382 | Soca-Chr8:17609577 | dispersed | |
| Soca | Soca-Chr5:25255592 | Soca5g02624 | Soca-Chr5:28606086 | wgd |