Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02394	ATGGCTGCAAATTCAGATGAGATCAAGAATGTTGAAGAATCAAAAGTTCATGTTTTCTCATCATCATCAGAGTTGCTTGAGAAGTTACATAAGGAGTGGAGTTCAGTTGAGAAGATACCATATCCAGCAATGTATTCTAGTGTTTATGGTGGGATTATTCTTGATCCGGCATTGATGGTCATTCCTATAGATGATCATATGGTGCATCGAGGACATGGTGTGTTCGATACTGCCATCATTCTTGATGGATACATATATGAATTGGATGGTCATCTTGATCGGTTCCTTCTATCAGCAGGAAGAGCAAAAATCTCATCTCCATTTCCAAAATCAACTCTTCGCACCATCATCATCCAGCTGGCAGCAGCATCAAACTGCAAGAAAGGAACTTTAAGATATTGGTTAAGTGCAGGGCCAGGCGATTTCTTACTATCTAATTCAGGGTGCCCAACATCTGCATTCTATGCAGTTGTTATAGACGAAGAGTTTGCACAACATAAAGAAGGTGTGAAAGTGATAACTTCCACAATCCCTATGAAAGTACCTCTATTTGCAACAAGCAAAAACGTGAACTACCTCCCGAATGTTCTCTCAAAGTTAGAAGCTGAAGAGAAAGGTGCATTTGCATCCATTTGGGTCGATGATGAAGGGTTTGTAGCCGAGGGTCCAAATGTGAATGTAGGTTTCGTGACCCATGATAAAGAGCTTATTTTGCCTTATTTTGACAAGATTTTAAGTGGGTGCACTGCAAAACGACTTCTTGAGTTAGCTCCAAAGTTAGTTGAAAATGGGCGTTTGAAAAGTGTGAAAGTTGGGAATATAACTGTTGAGGCAGCGAAACAAGCAGCTGAAATGATGTATATTGGAAGCACGCTTCCTGTACTACCAATTATCGAGTGGGATGAAAAGCCTATCGGCGATGGTAAAGTCGGGGAGTTGACAATGGCATTATCGGACCTTGTTTGGGACGATATGGTGGCAGGGCCCGAGACACATAGGTTAAAAGTTCCTTATGTTTAA	1020	41.18	MAANSDEIKNVEESKVHVFSSSSELLEKLHKEWSSVEKIPYPAMYSSVYGGIILDPALMVIPIDDHMVHRGHGVFDTAIILDGYIYELDGHLDRFLLSAGRAKISSPFPKSTLRTIIIQLAAASNCKKGTLRYWLSAGPGDFLLSNSGCPTSAFYAVVIDEEFAQHKEGVKVITSTIPMKVPLFATSKNVNYLPNVLSKLEAEEKGAFASIWVDDEGFVAEGPNVNVGFVTHDKELILPYFDKILSGCTAKRLLELAPKLVENGRLKSVKVGNITVEAAKQAAEMMYIGSTLPVLPIIEWDEKPIGDGKVGELTMALSDLVWDDMVAGPETHRLKVPYV	339

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02394	339	Gene3D	-	12	158	IPR043131	-
	Soca5g02394	339	PANTHER	AMINO-ACID AMINOTRANSFERASE	33	329	IPR050571	GO:0019752(PANTHER)
	Soca5g02394	339	FunFam	D-amino-acid transaminase, chloroplastic	21	159	-	-
	Soca5g02394	339	Gene3D	-	161	329	IPR043132	-
	Soca5g02394	339	SUPERFAMILY	D-aminoacid aminotransferase-like PLP-dependent enzymes	49	326	IPR036038	GO:0003824(InterPro)
	Soca5g02394	339	FunFam	D-alanine aminotransferase	161	328	-	-
	Soca5g02394	339	Pfam	Amino-transferase class IV	73	300	IPR001544	GO:0003824(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02394	K18482	4-amino-4-deoxychorismate lyase [EC:4.1.3.38]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr4:36972672	Soca5g02394	Soca-Chr5:25503076	dispersed
	Soca	Soca-Chr4:37085161	Soca5g02394	Soca-Chr5:25503076	dispersed
	Soca	Soca-Chr5:11546865	Soca5g02394	Soca-Chr5:25503076	dispersed
	Soca	Soca-Chr5:11546865	Soca5g02394	Soca-Chr5:25503076	dispersed
	Soca	Soca-Chr6:17677095	Soca5g02394	Soca-Chr5:25503076	transposed
	Soca	Soca-Chr5:25503076	Soca5g02646	Soca-Chr5:28847352	wgd