Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02429	ATGGATAGGCGTACTCAAAATATTGCACCATTAGCAATGGCTTCTTTTACAACACTCTCACTAATCTCCTCATTATGCTTTCTTTTGCTACTATTCAACATCTCCACTGCACAGGTTCCTGCCTCCGAAACCTTTACCTATGTAAATGAAGGTTTTCTAAGTCAGCTTGACCCTGATACCGAAAGAATTCTCGCTGAATACGGCCCAACTTATCGTACACTTGAGCCGGTCACAGGACGTTTCCGTCTATGTTTCTACAACACCACACCTAATGCCTACACTCTTGCTCTACGCGTGGGGTTCACCCGCCGGGATACATTGCGATGGGTATGGGAAGCCAACCGTGGTCGCCCAGTTCACGAAAATGCTACATTATCGTTAGGTACCAATGGAAACCTAATCCTGGCTGAAGCTAACGGCCAGGTTGTATGGCAAACCAACACCGCTAACAAAGGCGTGGTTGGATTTGCCATATTGTCTGATGGTAACATTGTGCTTCGTGACTCCAATGGAAGCTTTGTATGGCAAAGTTTTGATTCCCCAACTGACACCCTCTTGGTTGGCCAATCTCTAAGAGTCAATGGAGGCCCATACAAGCTTGTGAGCCGGGATTCGGTCACTAACAATGTTAATGGTGTTTATAGTCTCGTAATAGAACCTAAAAGACTGGGTTTGTACTATAAAGACATGCTTTACTGGGCGGCCCCCTTCCCCTTCTCAAGGAGAACAAATGTGAATTTGACGGAAGCTAAGTTCCGAATTGCCGAAGCCGAATATGAAGGAAACGATTTTCACGAACTCGATTGTACTATCACGAACGGTCGACCCATTGAAACACCCTCTTTAACTATGGGGACGGTTCTATGCAATAGCACGTTATCATATCTCCGACTCGGCATTGATGGGAACCTAAGAGTCTTCACTTTTCGGCCAGGTGTGCGCAATAATGCATGGTTTGAGTTGTACACTTTGTTTGATAGAGAGGTGAGCGTAGCGGATTTGGTTAGCGGGTCTGGAAGGGTTGTTGAAGACGAGTGCCAATTACAAGATCGGTGTGGGAAGTTTGGGCTTTGTGAAAACAGTCAATGTGTTGGGTGCCCTACCCCGAATGGGGTGTTTGCGTGGAGCAACGATTGTGACTCAAAGCCACCAGGTTGTAATGTGAGTGGCTTTCGATATTATGAGCTCAAAGGAGTTGACCATTTCACGGTTAAGTACACATCTGGAAGCGGTCGGACGCCTAGGAGTAATTGTGAGAACAGATGCACAAAGGATTGCAACTGCATGGGGTATTTTTATAACACGGATAGCGCGAGGTGTTGGGTCGTTAGCGAGTTGAAAACATTGACGCGAGTTGGGAACTCGAGTCACTTGGCCTACATCAAAACACCCATCTAG	1398	46.42	MDRRTQNIAPLAMASFTTLSLISSLCFLLLLFNISTAQVPASETFTYVNEGFLSQLDPDTERILAEYGPTYRTLEPVTGRFRLCFYNTTPNAYTLALRVGFTRRDTLRWVWEANRGRPVHENATLSLGTNGNLILAEANGQVVWQTNTANKGVVGFAILSDGNIVLRDSNGSFVWQSFDSPTDTLLVGQSLRVNGGPYKLVSRDSVTNNVNGVYSLVIEPKRLGLYYKDMLYWAAPFPFSRRTNVNLTEAKFRIAEAEYEGNDFHELDCTITNGRPIETPSLTMGTVLCNSTLSYLRLGIDGNLRVFTFRPGVRNNAWFELYTLFDREVSVADLVSGSGRVVEDECQLQDRCGKFGLCENSQCVGCPTPNGVFAWSNDCDSKPPGCNVSGFRYYELKGVDHFTVKYTSGSGRTPRSNCENRCTKDCNCMGYFYNTDSARCWVVSELKTLTRVGNSSHLAYIKTPI	465

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02429	465	Pfam	D-mannose binding lectin	110	194	IPR001480	-
	Soca5g02429	465	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5	74	463	IPR051343	-
	Soca5g02429	465	SMART	blect-4	65	181	IPR001480	-
	Soca5g02429	465	PIRSF	SLG	11	465	IPR035446	-
	Soca5g02429	465	SUPERFAMILY	alpha-D-mannose-specific plant lectins	100	234	IPR036426	-
	Soca5g02429	465	CDD	B-lectin	66	181	IPR001480	-
	Soca5g02429	465	ProSiteProfiles	Bulb-type lectin domain profile.	49	179	IPR001480	-
	Soca5g02429	465	Gene3D	-	71	178	IPR036426	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02429	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:25985622	Soca5g02674	Soca-Chr5:29369455	dispersed
	Soca	Soca-Chr5:25952642	Soca5g02429	Soca-Chr5:25985622	tandem