Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Soca5g02432 | ATGGAAGGTTTAAGGCTAGAAGACACGATAAGGAAGGCTGGAGAAAAGTATAGGTCATTTCTCCATGAAGAAGCAGAGAACAACACCAATTGGAGACACGGCGGTCCACCCATTTACGATGTCGTAACAAACTGTTTGAAGACGGCCGAACCAAGTAATTACCAGCTGGTTTTTATGTGTGTTACATGCGTTTGGGAAAAGGGATCATTAGAAGAAACCGTACAAAATGCAATAAAATCATGGGAGATGGAACTAAGCCACAAGACTCGCATACAAGACTTCAAGACTATCAATCCTGAAAAGTTCATGCTTATTGTCAACGGCAGGGAGGGTTTATCAGCCGAGGAAACATTGAAGATAGGGAGTTATAACGCCTTACTTAAGAATACACTTCCTGAAGAATACAAGTATTACAAAGCTGAAGAAGAAACCTTTGAATCGTCTCATGATGTTTTCCGATCGGCCTTTCCTCGTGGATTCGCATGGGAAGTGATAAGCGTCCATTCCGGACCACCTGTGATAACGTATAAGTTCAGGCATTGGGGTTACTTTGAAGGTCCATACAAAGGCCATGCCCCTACTGGCGAAATGGTTGATTTCTATGGAATGGGCATCCTCAAGGTTGACGAATCATTGAGAGCCGAAGATGTCGAGATTTATTATGATCCAGCTGATCTTATCTCAAAATTGATCAAGGGACCGTTGATCTCTGGAGACCAAGACGTTGTCGTGGATACTTCTGCGGCACACACGGGCAGTTGCCCCTACCAGAATTAA | 777 | 43.76 | MEGLRLEDTIRKAGEKYRSFLHEEAENNTNWRHGGPPIYDVVTNCLKTAEPSNYQLVFMCVTCVWEKGSLEETVQNAIKSWEMELSHKTRIQDFKTINPEKFMLIVNGREGLSAEETLKIGSYNALLKNTLPEEYKYYKAEEETFESSHDVFRSAFPRGFAWEVISVHSGPPVITYKFRHWGYFEGPYKGHAPTGEMVDFYGMGILKVDESLRAEDVEIYYDPADLISKLIKGPLISGDQDVVVDTSAAHTGSCPYQN | 258 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Soca5g02432 | 258 | PANTHER | PATHOGENESIS-RELATED FAMILY PROTEIN | 10 | 256 | IPR053218 | - | |
| Soca5g02432 | 258 | SUPERFAMILY | NTF2-like | 144 | 229 | IPR032710 | - | |
| Soca5g02432 | 258 | Gene3D | - | 125 | 231 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Soca5g02432 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Soca | Soca-Chr5:26008402 | Soca5g02432 | Soca-Chr5:26008402 | tandem | |
| Soca | Soca-Chr5:26008402 | Soca5g02433 | Soca-Chr5:26008402 | tandem |