AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Soca5g02498 ATGGAAGCACTTTGGAATTTAGAAGATAAATGGAACCTTTCAACACAGGAAGCCGTGATCTTCTGTGCCTGTACTGCATTTCTCGTTGTGGTGGTCGTTGGGTTTTGTGTCACAACGGCTTTGAGGAAGAGGGCTAGAAGTGACATTGAAGAACGTCATGGTGTGGTAGAGTTGGAGGTGGCAAGAGGGTCAACGGATCAACGGGTAAGGGTGAAAAAGGGGTTGACCGGGTCTGTCAGGTGGAGTAAGGCTAGTAAATGGGATGGGAATTTGACTGCGAGTAGGAAAGAGCAGCCCACACCGTTGCTTGCTAGAGGTGGTGGTGAGGTGGGGTGGCCGAGTCATAATGCTGCTTCTCCAGTGTGGCAACGGCCTATACTTATGGGTGAGAAGTGTGAGTTTCCGCGGTTTAGTGGCCTCATTCTTTACGACGAAAGTGGTAAACCGCTTGATCAGGGTCACTCTGTTGTTGATATCCAGGAACAGCCCACGGCCGGAGCTACTTTGCGGGATCTTCTTCTATAG 525 50.29 MEALWNLEDKWNLSTQEAVIFCACTAFLVVVVVGFCVTTALRKRARSDIEERHGVVELEVARGSTDQRVRVKKGLTGSVRWSKASKWDGNLTASRKEQPTPLLARGGGEVGWPSHNAASPVWQRPILMGEKCEFPRFSGLILYDESGKPLDQGHSVVDIQEQPTAGATLRDLLL 174
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Soca5g02498 174 PANTHER F2P16.13 PROTEIN-RELATED 9 152 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Soca5g02498 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Soca Soca-Chr5:27022253 Soca5g02715 Soca-Chr5:29876235 dispersed
Soca Soca-Chr5:27022253 Soca5g02498 Soca-Chr5:27022253 tandem