Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Soca5g02552 | ATGGCAAAGCAAAAGATTGTAGTGAAGGTGACCATGAACTGCGAGAAGAAATCTCGCAAGGCTTTGAAGATTGCGGTTAGTCTTTATGGAGTGGAGTCAGCGTCGCTAGTTGGATCAGATAAAGACTCAATAGAGGTGATTGGTGAAGGAACCGACCCGGTTGAACTAACGAAGTTGCTAAGGAAAGGTGTAGGATGCACTCAACTAGTTAGTGTTGGTCCAGTCGAAGAGAAGAAACCCAAAGTTGAGGAAACGAAGCCCACGATTGTGCCTCTGCAAATTAATCCTTACCAGTACTGCTATAATGGTTATGGGATGCCCTACTACTATTGTTATGAAATATAA | 345 | 43.19 | MAKQKIVVKVTMNCEKKSRKALKIAVSLYGVESASLVGSDKDSIEVIGEGTDPVELTKLLRKGVGCTQLVSVGPVEEKKPKVEETKPTIVPLQINPYQYCYNGYGMPYYYCYEI | 114 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Soca5g02552 | 114 | Gene3D | - | 1 | 78 | - | - | |
| Soca5g02552 | 114 | PANTHER | OS04G0464100 PROTEIN | 4 | 86 | IPR044296 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Soca5g02552 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Soca | Soca-Chr5:27920637 | Soca5g02767 | Soca-Chr5:30696438 | dispersed | |
| Soca | Soca-Chr5:27907481 | Soca5g02552 | Soca-Chr5:27920637 | tandem | |
| Soca | Soca-Chr5:27920637 | Soca5g02553 | Soca-Chr5:27939230 | tandem |