Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02611	ATGGCTCTCCAAGCTACTTGTTGCTCTGTTAACAATCTTAAGGCAAAAACCACTTCGTGTTTGAAAGATTCAACCCTCTTTGGGATTTCGCTTTCAGACCACCTGAAAGCAGCTGATTCCACGTCATTAACATCAAGAAACAAGATGGAATTCACCCGTAAAAAAGTGTTTAGACCACAGGCGATAGCCACCACAAGTGCTCCAGCTGTGGCCCGGGCAGCACCAGAGGGAAAGAAGACATTGAGAAAAGGCAGTGTCATCATCACTGGAGCTTCATCCGGTTTGGGTCTAGCCACAGCTAAATCATTGGCAGAAACAGGGAAGTGGCACGTAATTATGGCCTGTAGAGACTTTCTAAAAGCGGAAAGAGCAGCTAAATCAGCTGGAATGTCAAAAGAGAATTACACGGTGATGCATTTAGATCTTGCATCTATGGACAGTGTGCGACAATTCGTTGCCAACTTCAAGCAATCGGGTAGACCGCTAGACGTATTGGTCTGCAATGCAGCTGTGTACCAACCAACGGCCAGAGAACCGACCTTCACAGCTGATGGAATCGAGCTAAGTGTCGGAACTAATCATCTTGGTCACTTCCTTCTTTCAAGATTATTGCTTGATGACATGAAACAATCTGATTACCCTTCAAAAAGGCTCATTATTGTTGGGTCAATTACTGGAAACACTAACACTTTGGCAGGAAATATACCTCCTAAGGCTCACTTAGGGGACATGCGGGGTTTAGCTGGTGGTTTGAACGGCTTAAATAGTTCAACCATGATCGATGGAGGAAAGTTCGACGGTGCAAAGGCATATAAAGATAGCAAGATATGCAACATGCTCACAATGCAAGAGTTTCATAGGAGATATCATGAAGAAACTGGAATTACATTCGCTTCTTTATACCCCGGTTGCATTGCTACCACAGGGTTGTTTAGAGAACACATTCCTCTTTTCCGAATATTGTTTCCTCCATTCCAAAAGTTTATTACCAAAGGGTATGTCTCTGAAGCTGAATCTGGCAAACGACTTGCACAGGTTGTGGGTGATCCTAGCTTGACGAAGTCGGGTGTGTATTGGAGCTGGAACAAAGATTCGGCTTCGTTTGAGAACCAGTTGTCTGAAGAAGCAAGTAATGAGAGCAAGGCTCGTAAGGTGTGGGAGATAAGCGAGAAGCTTGTGGGTTTGGCTTGA	1191	44.58	MALQATCCSVNNLKAKTTSCLKDSTLFGISLSDHLKAADSTSLTSRNKMEFTRKKVFRPQAIATTSAPAVARAAPEGKKTLRKGSVIITGASSGLGLATAKSLAETGKWHVIMACRDFLKAERAAKSAGMSKENYTVMHLDLASMDSVRQFVANFKQSGRPLDVLVCNAAVYQPTAREPTFTADGIELSVGTNHLGHFLLSRLLLDDMKQSDYPSKRLIIVGSITGNTNTLAGNIPPKAHLGDMRGLAGGLNGLNSSTMIDGGKFDGAKAYKDSKICNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRILFPPFQKFITKGYVSEAESGKRLAQVVGDPSLTKSGVYWSWNKDSASFENQLSEEASNESKARKVWEISEKLVGLA	396

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02611	396	NCBIfam	protochlorophyllide reductase	82	396	IPR005979	GO:0016630(InterPro)
	Soca5g02611	396	CDD	LPOR-like-SDR-c-like	83	395	-	-
	Soca5g02611	396	Gene3D	-	73	396	-	-
	Soca5g02611	396	PANTHER	PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC	2	396	IPR005979	GO:0016630(InterPro)
	Soca5g02611	396	Pfam	short chain dehydrogenase	86	228	IPR002347	-
	Soca5g02611	396	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	81	362	IPR036291	-
	Soca5g02611	396	PRINTS	Glucose-ribitol dehydrogenase family signature	85	102	IPR002347	-
	Soca5g02611	396	PRINTS	Glucose-ribitol dehydrogenase family signature	293	310	IPR002347	-
	Soca5g02611	396	PRINTS	Glucose-ribitol dehydrogenase family signature	160	171	IPR002347	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02611	K00218	protochlorophyllide reductase [EC:1.3.1.33]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr4:61143126	Soca5g02611	Soca-Chr5:28451371	dispersed
	Soca	Soca-Chr4:71556019	Soca5g02611	Soca-Chr5:28451371	dispersed
	Soca	Soca-Chr4:80562384	Soca5g02611	Soca-Chr5:28451371	dispersed
	Soca	Soca-Chr5:25098223	Soca5g02611	Soca-Chr5:28451371	wgd