Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Soca5g02783 | ATGATTCAGGTAAAGGCCTTACGGTTGAGGCAAGTAAGGGCCCCACTGTTGGCATTGAGTCCGGGAGCACACATGGACCCGTCACAAGATTCACGGCTCCCTGTGGGTACAATAAGACGTGAAGTTGGGAGTCAACGAAGTCGTGCTGACCAAATTCATGAGACCCCCCATGAGATCAAGTCAGCTACATCTGGTTCTGAGTTTGGAAACTCCACCTTGCTAGGCAAAGCAGCATCTTCTCATGTCCCCTTTTCCATTGCAAGGCCTTCTTCAAACTATAATAATAGGCCGCAACAAGCAATTGGGCCGCAAAAAGCTATTGGTCCAAGTTTGGAATGGAAACCGAAACCAACAAACAGTGTTCTTGCTCAAGGGACTGTCTCAAAGGAGACAATTAAGCCAGCAGGACTTCCAGTTGAGGTTTTCATTCCAACCCTGTCCGCATCAAGTAATGTTGATTCAATAGATGGTACTAGTGGACTTGAGAAGAAGCTAGAGGAGTCGCACATTTCAGACGGTCAACACGTTATTATTCCAAATCACCTTCATGTTCCCGAAGCCGAGAAACTTGGGTTTTGCTTTGGAAGTTTTGATGGCAGTTTTGGTTTAGATCTTGGCTCCTCAAATGGTCCAACGAGTGACAAGAATTCCGTGGCTTCTGAGGTGGCTGATGAAAGTATAAAGGAGCAGCCTAGAGATCAAAATGCTTCGACAACTGGTGATGAAGGAGATCTTATTGATAGTCAAACATCCTCTAGTAACGAGCCCAAAAATTTATTAGTTGATGGTGATGTAGTATTAAATGAGGACCACTGGGAGTCCAAGCAAGAGACCTCACTCCCGATTGCAGGCCATCAATACCCAGCTGTTCAGACATCTCCTAACTTCAGTTTTGGCTTCATGCCACCAGTGATTGGCAGCCACCTCACATCTTTTGAAGGCAACGAGTCTCAGGGACATGATGGTTTGCAGGTCCCTAGCTTTGTAGTTCAGCAACCATCTGACCCAGCAAGCTATTATGCTCAATTCTATCGTTCTGGTGCTGACACTGATGGTCGTATGTCACCCTTACATTCAAACGGGGTTCCAACCAAGTACAATGGAAATGTTTCGGTGTTATCTCCACAATCTTCTCAAGAGGTTGGGAACTCGCAAAGGTTGCCTGGTGCTGGTCCAACTCCGATAGGCACCCCACAACCTGGTGGGGTTATGCAAAGCTCCATAGCTCTCACTCAACAACCATTTCCCGTTTTCAGGCAGCAAGCTGGGGTTCACTTACCCCATTTCCCTCCAAATTATATCCCATATGGTTCATATTTCCCCCCATTTTATGTCCCTCCTCCATCTATCCATCAATTTATGAGTAATGGATTCCCACAACAACCTCAAGCTGGTAGTATGTATCCGACTCCACTAGTGGCTAGCCCTAAATATCCACTTCCGCAATACAAGGCTGCAAGTAATACAGGGAACACAGCTCATTTTGGAGTGCCAGGAAGCTATGGACCTTATGGCTCGACACATACGGGCTATAATACTGGTTCAGCCACTACAGCTGGCAATTTGACCACTAATGAAGACCTGGGTGGATCACAGTTCAAAAAAAATAATGTCTACATTACTGGATAG | 1629 | 46.04 | MIQVKALRLRQVRAPLLALSPGAHMDPSQDSRLPVGTIRREVGSQRSRADQIHETPHEIKSATSGSEFGNSTLLGKAASSHVPFSIARPSSNYNNRPQQAIGPQKAIGPSLEWKPKPTNSVLAQGTVSKETIKPAGLPVEVFIPTLSASSNVDSIDGTSGLEKKLEESHISDGQHVIIPNHLHVPEAEKLGFCFGSFDGSFGLDLGSSNGPTSDKNSVASEVADESIKEQPRDQNASTTGDEGDLIDSQTSSSNEPKNLLVDGDVVLNEDHWESKQETSLPIAGHQYPAVQTSPNFSFGFMPPVIGSHLTSFEGNESQGHDGLQVPSFVVQQPSDPASYYAQFYRSGADTDGRMSPLHSNGVPTKYNGNVSVLSPQSSQEVGNSQRLPGAGPTPIGTPQPGGVMQSSIALTQQPFPVFRQQAGVHLPHFPPNYIPYGSYFPPFYVPPPSIHQFMSNGFPQQPQAGSMYPTPLVASPKYPLPQYKAASNTGNTAHFGVPGSYGPYGSTHTGYNTGSATTAGNLTTNEDLGGSQFKKNNVYITG | 542 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Soca5g02783 | 542 | MobiDBLite | consensus disorder prediction | 232 | 258 | - | - | |
| Soca5g02783 | 542 | MobiDBLite | consensus disorder prediction | 369 | 404 | - | - | |
| Soca5g02783 | 542 | MobiDBLite | consensus disorder prediction | 43 | 57 | - | - | |
| Soca5g02783 | 542 | PANTHER | FLOCCULATION PROTEIN (DUF1296) | 26 | 542 | IPR044277 | GO:0051082(PANTHER) | |
| Soca5g02783 | 542 | MobiDBLite | consensus disorder prediction | 208 | 258 | - | - | |
| Soca5g02783 | 542 | MobiDBLite | consensus disorder prediction | 369 | 386 | - | - | |
| Soca5g02783 | 542 | MobiDBLite | consensus disorder prediction | 43 | 72 | - | - | |
| Soca5g02783 | 542 | MobiDBLite | consensus disorder prediction | 88 | 113 | - | - | |
| Soca5g02783 | 542 | MobiDBLite | consensus disorder prediction | 58 | 72 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Soca5g02783 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 155593 | Soca2g04425 | Soca5g02783 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Soca | Soca-Chr2:83985905 | Soca5g02783 | Soca-Chr5:30860055 | dispersed | |
| Soca | Soca-Chr2:84564837 | Soca5g02783 | Soca-Chr5:30860055 | dispersed | |
| Soca | Soca-Chr5:30860055 | Soca5g02783 | Soca-Chr5:30860055 | tandem |