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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02789	ATGGCAGCAGTAGAAGCTGCTTCTAGAATCTTCCAAACATCACTACCTCAGACCATATCATCCCTTAGACAAAAACCCTGTTCCCAAACACTCTCTTACAAAAGATCCTCGTCACCTTTCATTATCCGTTGCACTGTATCAACCAGCAGCAGTAGTAGTAGTGATACATCAGCTAAGGGAGTGGCTCAGCCGATACCGTGGGGTTGCGAAATCGATTCTGTTGAGAATGCAGCTGCATTGCAGAAATGGTTGACTGAGTCAGGTTTGCCTGATCAAAAAATGGATATAAGAAAAGTTGATATTGGTGAGAGAGGACTTGTTGCTGTTAATAATATTAGAAAGGGTGAAAAGTTGTTGTTTGTGCCTCCTTCACTTGTTATTTCGGCTGATTCGGAGTGGACTTTTCCAGAGGCCGGGGAAGTTATGAAGAGATATGACGTACCCGACTGGCCATTAATTGCAACCTATCTAATTAGTGAGGCAAGTCTTATGAGTTCGTCTAGATGGAGCAACTATATATCAGCCTTACCAAGACAGCCTTACTCGCTTTTGTACTGGACACGTGCGGAGTTAGATAGGTACTTGGAAGCATCCCAGATTAGAGAGCGGGCCATTGAAAGAATCAATAATGTAACTGGAACATACAATGATTTGAGAGCAAGAATCTTCTCTAAGCATCCTAATTTATTTCCTGAAGAGGTATTCAATATGGAAACGTTTAGATGGTCCTTTGGCATTCTATTTTCACGTTTGGTTCGATTACCCTCATTGGATGGAAGAGTTGCTTTAGTCCCGTGGGCTGATATGTTGAATCATAGTTGTGATGTGGAAACCTTTTTGGATTATGATAAATCAACAAAGGGAGTTGTATTCACCACGGATCGTGGATACCAGCCAGGTGAGCAGGTGTTCATCTCATATGGTAGGAAATCTAATGGTGAACTCTTGCTCTCGTACGGGTTTGTGCCAAGGCAAGGGACAAACCCACGTGACTCAGTTGAGCTGCCATTGGCACTTAAAAAATCAGATAAATGTTACGAACAGAAGGTGGAAGCTCTGAAGAAGCATGGATTATCAGCATCACAATGTTTTCCATTGCAAGTCACTGGTTGGCCATTGGAGCTGATGGCATATGCATTTTTAGCAGTCAGTCCCCCTAGCATGAGCGGAAAGTTTGAAGAGTTGGCTGCTGCAGCATCGAATAAAACCAACAGCAATAAGGAACTCAGATATCCTGACCTAGAGGAACAAGCATTCCAGTTTATCTTGGATAGCTGTGAATCCAGTATATCAAAGTACACCAAGTTCCTTCAGGCTAGCGGGTCCATGGATTTGGATATAACATCTCCTAAGCAGCTCAACCGGAAAGTGTTCCTTAAACAGTTGGCTGTGGACTTGTGCAATAGCGAACAAAGGATTCTCTTCCGTGCTCAATATATATTGAGGAGAAAGTTGAGAGATATGAGGAGCGGTGAACTGAAGGCCCTAAATTTGTTTGACAGTGTCACAAAGTTCTTCAAATAA	1524	42.72	MAAVEAASRIFQTSLPQTISSLRQKPCSQTLSYKRSSSPFIIRCTVSTSSSSSSDTSAKGVAQPIPWGCEIDSVENAAALQKWLTESGLPDQKMDIRKVDIGERGLVAVNNIRKGEKLLFVPPSLVISADSEWTFPEAGEVMKRYDVPDWPLIATYLISEASLMSSSRWSNYISALPRQPYSLLYWTRAELDRYLEASQIRERAIERINNVTGTYNDLRARIFSKHPNLFPEEVFNMETFRWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVETFLDYDKSTKGVVFTTDRGYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPLALKKSDKCYEQKVEALKKHGLSASQCFPLQVTGWPLELMAYAFLAVSPPSMSGKFEELAAAASNKTNSNKELRYPDLEEQAFQFILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRAQYILRRKLRDMRSGELKALNLFDSVTKFFK	507

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02789	507	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	338	506	IPR036464	-
	Soca5g02789	507	Pfam	Rubisco LSMT substrate-binding	341	474	IPR015353	-
	Soca5g02789	507	Gene3D	set domain protein methyltransferase, domain 1	73	322	-	-
	Soca5g02789	507	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	77	482	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Soca5g02789	507	FunFam	Rubisco methyltransferase family protein	327	490	-	-
	Soca5g02789	507	Coils	Coil	201	221	-	-
	Soca5g02789	507	Gene3D	-	326	494	IPR036464	-
	Soca5g02789	507	SUPERFAMILY	SET domain	76	324	IPR046341	-
	Soca5g02789	507	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	61	321	-	-
	Soca5g02789	507	Pfam	SET domain	104	308	IPR001214	GO:0005515(InterPro)
	Soca5g02789	507	CDD	SET-RBCMT	87	322	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Soca5g02789	507	ProSiteProfiles	SET domain profile.	92	308	IPR001214	GO:0005515(InterPro)
	Soca5g02789	507	PIRSF	RMT-SET	2	504	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Soca5g02789	507	SMART	set-7	92	314	IPR001214	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02789	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:30925410	Soca5g02789	Soca-Chr5:30925410	tandem

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Soca	SET	1.6e-14	No_clan		TR	SET