Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02799	ATGTTTCATACAGTTTTAACGTTTGTTGTTATATTTTCGTTGTTAAAAACCCACGTTGCCGGGATTAGATTTGTGATCGATAGAGAAGAATGTTTGTCTCATAATGTTGATTATGAGGGAGATACGGTTCATGTTTCTTTCGTTGTAATTAAGGCAGAATCGCCATGGCATTTTTCCGAGGACGGTGTTGATCTAGAGATAAAAGGCCCGGATGGAGAGGAGGTATACAATGTACATGATAAATCTAGCGAGATGCACGAGTTTATGGCTCAAAAGAAAGGTTTATACCATTTTTGCTTCATAAACAGGTCTCCGTATCACGAGACCATTGACTTTGATGTTCAAGTTGCCCATTTTGCATCCAACGATCAACATGTAAAAGACGAGCATTTTAAGCCATTGTTTGATCAGATAGCAAAATTGGAGGAAGCTCTTTACAACATTCAGTTTGAACAGCATTGGTTAGAGGCAGAGAACGATCGACAGGCAGTTATAAATGAGAAAATGAGTAAGAGAGCAGTCCAGAAGGCTCTAATCGAGTCCGCAGCACTGATTGGAGCCAGCGTACTGCAGGTCTATCTTCTACAACGTCTGTTTGAGCGAAAAATGGGGTTCATCTAG	621	40.42	MFHTVLTFVVIFSLLKTHVAGIRFVIDREECLSHNVDYEGDTVHVSFVVIKAESPWHFSEDGVDLEIKGPDGEEVYNVHDKSSEMHEFMAQKKGLYHFCFINRSPYHETIDFDVQVAHFASNDQHVKDEHFKPLFDQIAKLEEALYNIQFEQHWLEAENDRQAVINEKMSKRAVQKALIESAALIGASVLQVYLLQRLFERKMGFI	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02799	206	SMART	EMP24-GP25L-2	21	200	IPR009038	-
	Soca5g02799	206	Pfam	emp24-gp25L-p24 family-GOLD	28	200	IPR009038	-
	Soca5g02799	206	PANTHER	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	5	200	IPR015720	GO:0005783(PANTHER)\|GO:0005793(PANTHER)\|GO:0005794(PANTHER)\|GO:0006886(PANTHER)\|GO:0006888(PANTHER)\|GO:0007030(PANTHER)\|GO:0030134(PANTHER)
	Soca5g02799	206	ProSiteProfiles	GOLD domain profile.	29	116	IPR009038	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02799	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	155582	Soca2g04378	Soca5g02799

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr2:83935525	Soca5g02799	Soca-Chr5:30976445	dispersed
	Soca	Soca-Chr2:84519275	Soca5g02799	Soca-Chr5:30976445	dispersed
	Soca	Soca-Chr5:30976445	Soca5g02799	Soca-Chr5:30976445	tandem