Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02820	ATGTCAACGTCCTCGTCTTCTTCGTCACATGACGAGGGAGACGGTGGCAATGGGGGTGGTGGTGAGTTCGATGAGCCACCACATGCTCGTCAGCGTTTCAACTCGGCTGTGTGGCCTGAACCGTTTCTTGAAGCACTTGCTTCTCAAATCGCCATTGATACTGCTCTCACGTTTGGTCGCCTTGCTGCTGCAACTGCTCTTTTCAATCTTTTCCAGGTCTGTCGAACATGGCGAACCGTATCTCAGTCTAACCGCCTTTGGGAAACCCTGACACGGCGTATTTGGCATCGTAACCACCGCCTCCGCCTCCATCAGACGTGGTATGAAGAATACATTTACCGCCATAGAACAGCTAGAAACTTCCATGATAGAAGGTATATCTACAGCACCCTCAACTTCCCTCCAAATGATAACAACAATAATAATAACGAAATTCTCTCCTGCCGCCGCCTTGCACTATCTGATAACCACCTGGCTGCTGGCTTTTCCGACGGGTCTGTTCGCCTATTTGACCTTCCCATGAGTCGTCACGTGTCAACCTTCCATCCTCTTCAACGTAACCATCTTGGCCCGTTCTCTCGTACTGTCTGTGGGATCTTTTTTACAGAGGATGGGCTCGTATTCGCCTCACATGATGGTGATATTCATGTTGCAACTATCAACGGACCAGGAGCTACACGGAGGGCTTACTTAGGTGATGTGGTCGCTGATGGTGTCCTTGTGGATTTTGCTGGTTGTAACCAGTGGTGGGTCGGTCTTTATGCAGGTGTTCCAAACCGTGCCTTCCATGTACGAAATGGTAATACAGAAGAACTTGTATTCATTGGTGGCACATTGACCGACCCAGACGCCGTTGTTGGCTGGCACTTACTCGCAGACCTAACTGGACATGTTGGTCGAATCCGCATAGCAAATGATGATCTTGTGGTAGGTAATGATGATCTTGCGGTAGGTTTTACGAGAAGCAGGGTCGTTGTATTTGATTTGAGAAGCCGAATGATTTTAGGAGAGGAAGAGGTTGCGAGGCGGATAAATGTTGGTGCATCCGACGCTTATGATGGAGCTCTTGTGTTTGTAAATAGTAGGGGTTTAGCTAATGTACGCCAGGTGGGTAGTTTGGGGGAAATCTGTAGGTTCATGGCTCGTGGGGGGTTGCTTGGTTGCATGAACGGTGGCTACTATGTAATGTGCACTGGGGGTGGGATTCGAGTTTGGGAATGGAATCACGGAGGGTCCTTGGGCTTTTTAGGAGAAAGGATAGGGGACGCAACAGCGCTCATTGCAGATGAAAGGTATGTAGCGGCTTGTACCAATGATAACACCATTCATTTATGGGATTTTGGGGCACGTGATTTATAG	1359	48.86	MSTSSSSSSHDEGDGGNGGGGEFDEPPHARQRFNSAVWPEPFLEALASQIAIDTALTFGRLAAATALFNLFQVCRTWRTVSQSNRLWETLTRRIWHRNHRLRLHQTWYEEYIYRHRTARNFHDRRYIYSTLNFPPNDNNNNNNEILSCRRLALSDNHLAAGFSDGSVRLFDLPMSRHVSTFHPLQRNHLGPFSRTVCGIFFTEDGLVFASHDGDIHVATINGPGATRRAYLGDVVADGVLVDFAGCNQWWVGLYAGVPNRAFHVRNGNTEELVFIGGTLTDPDAVVGWHLLADLTGHVGRIRIANDDLVVGNDDLAVGFTRSRVVVFDLRSRMILGEEEVARRINVGASDAYDGALVFVNSRGLANVRQVGSLGEICRFMARGGLLGCMNGGYYVMCTGGGIRVWEWNHGGSLGFLGERIGDATALIADERYVAACTNDNTIHLWDFGARDL	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02820	452	Gene3D	-	42	122	-	-
	Soca5g02820	452	Gene3D	-	137	452	IPR015943	GO:0005515(InterPro)
	Soca5g02820	452	SUPERFAMILY	WD40 repeat-like	132	447	IPR036322	GO:0005515(InterPro)
	Soca5g02820	452	PANTHER	WD40 REPEAT PROTEIN 12, 37	27	408	-	-
	Soca5g02820	452	SUPERFAMILY	F-box domain	65	119	IPR036047	GO:0005515(InterPro)
	Soca5g02820	452	MobiDBLite	consensus disorder prediction	1	28	-	-
	Soca5g02820	452	ProSitePatterns	Trp-Asp (WD) repeats signature.	433	447	IPR019775	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02820	-	-

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Soca	None	None	None		TF	SAP