Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02824	ATGAATTCATCGTTCCAAATTGAGCCCACAAACAAAAAACTAAAACTATTACATGATCTTGATCTTGATCTTGATCTTGATCTTGATGATCATAATGATCAAGATTATGCAATTCATGGTGACCAATTTTTGCTACAAAATTTACCTAGAGATGTGCTTTTGGACATACTCACTAGGCTGCCAATATCATGCTTGATTCAGTTCAAGTTAGTATGCCACTCATGGAACTTATTGTCCATGGACCCTGAACTAGCCCCGGTTCACCATGCTGCCATGGCGAAAAACGACCCAATGTTTATGTTCCACTGCGATTACCCAATTCGAAACCAACTCTCTTTTGTTGAATTATCATCAAATGATGATGAAAATATTGTAAGGAAGATATCAATTCCTTTTTGTGACTCCATGCCAGAGTTTAATGTTGTGGGATCGTGTAATGGTTTATTATGTATGTCGGATTCGCTGTATGGGGAACCTGTTTACGTATTTAACCCGTTTTCAAGGGATTATCTTGAGTTACCGAAATCTAAGCAGTTTGATGAACAAGAAGTGATATTTGGGTTCGGGTTTCATCCGGTTACAAAGGAATACAAGGTCGTTAAGATTGTGTATTATAGAAACTCACATGGACGGAAAAGGGTCATCAGAAACAATAGGAATTACCCGCAATCTGAAGTTCAAGTACTCACCATCTCCAAACAAATGAACAACAGTTCATGGAGATGCATTGGGAAAATGCCTTATCAGATTGATAGACAATTAAAAGAAGTTGCATTGGTAAATGGGAGACTTAATTGGTTGAGTAGGCTCAGGCGGGTTTCTGGGGTTTTAGACCGGGAGATCATCTCATTTGACCTGAAAAACGAGCAGTTTAAAGTGGTGGTGAAGGCTAGTAATATGGTAGTTTTCAACAGCAACCATCATTTGGCCGTGGTGCGAGGGTGTTTAGCAGTTGTTGCTCCATGTGGGTATGGGAAGTTGGAGATTTGGGTTATGAAGCAATACGGCATCAAGGAATCTTGGATGAAGGAGTTTGTGATTCATGGAGTGTACCATGTGAAAGTGCCGAACCATGAGTACCAACACGGGATATGGAGGCAAGCATTAAGCAAGAGGATGGTTCGGGTTCTTTGTGTTCTGAAGAATGGAGAGATCTTGTTAGAGTATAGAGGAGGGAGGTTGGTTAAGTACGATCCTAAATGGAAAGAGTTTAAAAATGTAGTGTTCCCTAAAATGCCCAAATTGTGTCAAACAATTGTTCATGTTGGTACACTTAATTGGGTCCATAACTAA	1293	39.75	MNSSFQIEPTNKKLKLLHDLDLDLDLDLDDHNDQDYAIHGDQFLLQNLPRDVLLDILTRLPISCLIQFKLVCHSWNLLSMDPELAPVHHAAMAKNDPMFMFHCDYPIRNQLSFVELSSNDDENIVRKISIPFCDSMPEFNVVGSCNGLLCMSDSLYGEPVYVFNPFSRDYLELPKSKQFDEQEVIFGFGFHPVTKEYKVVKIVYYRNSHGRKRVIRNNRNYPQSEVQVLTISKQMNNSSWRCIGKMPYQIDRQLKEVALVNGRLNWLSRLRRVSGVLDREIISFDLKNEQFKVVVKASNMVVFNSNHHLAVVRGCLAVVAPCGYGKLEIWVMKQYGIKESWMKEFVIHGVYHVKVPNHEYQHGIWRQALSKRMVRVLCVLKNGEILLEYRGGRLVKYDPKWKEFKNVVFPKMPKLCQTIVHVGTLNWVHN	430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02824	430	SUPERFAMILY	F-box domain	40	102	IPR036047	GO:0005515(InterPro)
	Soca5g02824	430	Pfam	F-box-like	45	84	IPR001810	GO:0005515(InterPro)
	Soca5g02824	430	ProSiteProfiles	F-box domain profile.	42	87	IPR001810	GO:0005515(InterPro)
	Soca5g02824	430	Gene3D	-	41	85	-	-
	Soca5g02824	430	Pfam	Domain of unknown function (DUF295)	121	353	IPR005174	-
	Soca5g02824	430	PANTHER	OS02G0783600 PROTEIN	48	347	IPR052361	-
	Soca5g02824	430	NCBIfam	F-box protein interaction domain	143	381	IPR017451	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02824	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	155578	Soca2g04367	Soca5g02824

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr1:18550432	Soca5g02824	Soca-Chr5:31150710	dispersed
	Soca	Soca-Chr2:84344853	Soca5g02824	Soca-Chr5:31150710	dispersed
	Soca	Soca-Chr5:31150710	Soca8g01378	Soca-Chr8:17570055	dispersed
	Soca	Soca-Chr5:31150710	Soca2g04407	Soca-Chr2:84339467	transposed