Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g02836	ATGTTTCATCATCAAACACAACTTCCACAAAACATGTCGCTAACACCAACTGATCATCGTGATCTCACCGCGACTTCTGTTCGCTCGTGTGGTGAGATTCATGTGATTGTGGGTCCAATGTTTGCTGGTAAAACAACTGCCCTTCTTCGCAGGATCAAATCTGAAGCCACTATTGGCAGGAATATAGCAATGATAAAATCAAGCAAGGATAATAGATATGCAATAGATTCGGTTGTGACACATGATGGAACAAAGTATCCATGTTGGGCACTTCCCGATCTCTTGTCTTTCAAACAAAAACTTGGGGAGGAAGCTTATGACAAGTTGGATGTTATCGGGATTGATGAGGCACAGTTCTTTGATGATCTTTATGACTTTTGCTGTAAAGCTGCTGACCATGATGGGAAAACTGTTATAGTTCCTGGCCTTGATGGTGATTACTTAAGAAGGAACTTTGGTCCAGTGCTTGATATAGTACCTATTGCTGATACCATAACTAAGTTAACTGCCCGATGTGAATTATGTGGCAAACGAGCCCATTTTACTCTAAGGAAGGCCAGTGAGACAAAAACGGAGCTTATTGGTGGGGCAGATATGTATATGCCTGTTTGTCGTCAACATTATGTTAATGGACATATGGTGATCAAAACCGTTGCTTAA	660	41.21	MFHHQTQLPQNMSLTPTDHRDLTATSVRSCGEIHVIVGPMFAGKTTALLRRIKSEATIGRNIAMIKSSKDNRYAIDSVVTHDGTKYPCWALPDLLSFKQKLGEEAYDKLDVIGIDEAQFFDDLYDFCCKAADHDGKTVIVPGLDGDYLRRNFGPVLDIVPIADTITKLTARCELCGKRAHFTLRKASETKTELIGGADMYMPVCRQHYVNGHMVIKTVA	219

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g02836	219	PIRSF	Tdk	28	218	IPR001267	GO:0004797(InterPro)\|GO:0005524(InterPro)
	Soca5g02836	219	Gene3D	-	24	168	IPR027417	-
	Soca5g02836	219	Gene3D	-	169	210	-	-
	Soca5g02836	219	Pfam	Thymidine kinase	31	208	IPR001267	GO:0004797(InterPro)\|GO:0005524(InterPro)
	Soca5g02836	219	SUPERFAMILY	Glucocorticoid receptor-like (DNA-binding domain)	169	211	-	-
	Soca5g02836	219	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	31	169	IPR027417	-
	Soca5g02836	219	ProSitePatterns	Thymidine kinase cellular-type signature.	195	208	IPR020633	GO:0004797(InterPro)\|GO:0005524(InterPro)
	Soca5g02836	219	FunFam	Thymidine kinase	27	168	-	-
	Soca5g02836	219	PANTHER	THYMIDINE KINASE	25	216	IPR001267	GO:0004797(InterPro)\|GO:0004797(PANTHER)\|GO:0005524(InterPro)\|GO:0046104(PANTHER)
	Soca5g02836	219	FunFam	Thymidine kinase	169	211	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g02836	K00857	thymidine kinase [EC:2.7.1.21]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:31332904	Soca8g03304	Soca-Chr8:55349744	dispersed