Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Soca5g02838 | ATGGATGGCAGTGAGAACCAGGTTGAATCCAAAAGAATTGTTTTTGTGACTGTTGGCACAACATCGTTCGACTCTCTTGTTAAAACTGTTGACACTGACCAAGTAAAAGATGCGTTCTTAAAGAAAGGGTACACTCATCTTGTCATTCAAATGGGTCGTGGATCCTATGTCCCTAACAAGTCTAGTGGTGAAGATGGATCATTGGTTGTAGATTACTTTACGTTTTGTTCAAGCATTGCAGACTATTTGAGATCAGCATCTCTTGTTATAAGTCATGCAGGTTCAGGAAGCATATTTGAGACGCTCAGGCTGGCCAAACCTTTGATAGTGGTAGTCAATGAAGATCTTATGGATAACCATCAAAGTGAGCTTGCTGAAGAATTGGCAGAGAGGAAGCATCTGTTTTGTGCCCGGCCTCAAACACTCTACCAGGTCATTGAATCACTTGATTTAGATTCCATTGTTCCATACGAGTCAGGTGATGCTACCCCCGTTGCTAAACTAATTAATCGGCATCTGGGTTTTACTGCTGATTGA | 537 | 41.71 | MDGSENQVESKRIVFVTVGTTSFDSLVKTVDTDQVKDAFLKKGYTHLVIQMGRGSYVPNKSSGEDGSLVVDYFTFCSSIADYLRSASLVISHAGSGSIFETLRLAKPLIVVVNEDLMDNHQSELAEELAERKHLFCARPQTLYQVIESLDLDSIVPYESGDATPVAKLINRHLGFTAD | 178 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Soca5g02838 | 178 | FunFam | UDP-N-acetylglucosamine transferase subunit alg13 | 8 | 173 | - | - | |
| Soca5g02838 | 178 | SUPERFAMILY | UDP-Glycosyltransferase-glycogen phosphorylase | 44 | 149 | - | - | |
| Soca5g02838 | 178 | Gene3D | Glycogen Phosphorylase B; | 7 | 173 | - | - | |
| Soca5g02838 | 178 | PANTHER | UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG13 | 9 | 177 | IPR052474 | GO:0006488(PANTHER)|GO:0043541(PANTHER) | |
| Soca5g02838 | 178 | Pfam | Glycosyltransferase family 28 C-terminal domain | 13 | 167 | IPR007235 | GO:0016758(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Soca5g02838 | K07432 | beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] |